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Information on SUBCLASS 3.21.1
Subclass Accession number: 260
Subclass: 3.21.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  2.5 (>75 %)  2.5.1 (>75 %)  3.1 (>75 %)  3.1.3 (>75 %)  3.1.3.16 (>75 %)  
GO : GO:0016765 (>75 %)  GO:0016788 (>75 %)  GO:0016791 (>75 %)  GO:0030145 (>75 %)  GO:0042578 (>75 %)  GO:0046914 (>75 %)  
SCOP : 55199 (>75 %)  55205 (>75 %)  55209 (>75 %)  56299 (>75 %)  56300 (>75 %)  56310 (>75 %)  
Number of loops: 7

Average sequence ID (%) : 25.8 +/- 22.0
Average RMSD (Å) : 0.657 +/- 0.276

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXhXGpX
(φψ)-conformation: aappebb
Pattern: [qst]xx[AFILY][lmtv][il][AFLP][AGNQ][ACLMT][ILTV][ALY]x[G][KLT][GPT][ILTV][ILV]
Conservation:-0.294-1.082-0.924-0.501-0.2860.262-0.815-0.386-0.3300.197-0.229-0.7693.1950.2790.0270.4921.165
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ejd_A_1631ejd   A166182TVTIMSAATLAEGTTIIHHHHHHHHTTSBSEEEEaaaaaaaaaaxxexbbb
1ejd_A_3071ejd   A307323QAQFTLLNLVAEGTGVIHHHHHHHHHTSBSEEEEaaaaaaaaaaxxebbbb
1ejd_A_3701ejd   A373389SASLVLAGCIAEGTTVVHHHHHHHHHHSBEEEEEaaaaaaaaaaxxebbbx
1g6s_A_221g6s   A2541SNRALLLAALAHGKTVLHHHHHHHHHHSBSEEEEaaaaaaaaaaxxexbbb
1ji1_A_4841ji1   A487503TYLALIFQMTYVGTPTIHHHHHHHHTTSSSEEEEaaaaaaaaaaxxexwbx
1ji2_A_4331ji2   A436452FRLAVLFQMTYLGTPLIHHHHHHHHHHSSSEEEEaaaaaaaaaaxxexwbx
1oyw_A_501oyw   A5470SLCYQIPALLLNGLTVVHHHHHHHHHHSSSEEEEaaaaaaaaaabxebbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejd_A_1631ejd   A     PO4PHOSPHATE ION V - 163
1ejd_A_1631ejd   A     PO4PHOSPHATE ION G - 164
1ejd_A_1631ejd   A     PO4PHOSPHATE ION A - 165
1ejd_A_3701ejd   A     PO4PHOSPHATE ION L - 370
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE K - 22
1g6s_A_221g6s   A     GPJGLYPHOSATE K - 22
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE S - 23
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE V - 24
1g6s_A_221g6s   A     S3PSHIKIMATE-3-PHOSPHATE R - 27
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 50
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 52
1oyw_A_501oyw   A     MSESELENOMETHIONINE K - 53
1oyw_A_501oyw   A     MSESELENOMETHIONINE C - 56
1oyw_A_501oyw   A     MSESELENOMETHIONINE Y - 57
1oyw_A_501oyw   A     MSESELENOMETHIONINE P - 60
1oyw_A_501oyw   A     MSESELENOMETHIONINE N - 65
1oyw_A_501oyw   A     MSESELENOMETHIONINE G - 66
1oyw_A_501oyw   A     MSESELENOMETHIONINE L - 67

Clusters included in this Subclass
CLUSTER: HE.3.74
CLUSTER: HE.4.118
CLUSTER: HE.5.156