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Information on SUBCLASS 0.1.55
Subclass Accession number: 2605
Subclass: 0.1.55 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 40.5 +/- 16.8
Average RMSD (Å) : 0.600 +/- 0.265

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hDXD
(φψ)-conformation: bbaa
Pattern: [LV][AFV][FI][D][EP][D][NR][AQ][DP][ADE][L][KT]x[AE]
Conservation:-0.074-1.044-0.1521.964-0.1371.9640.091-0.4520.135-0.7170.787-0.347-1.567-0.452
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ag9_A_1421ag9   A142155LAIDEDRQPELTAEEEE-TTT-HHHHHHxbbbaaaaaaaaaa
1c0a_A_431c0a   A4760VFFDPDRADALKLAEEE-GGGHHHHHHHbbbbaaaaaaaaaa
1fue_A_1371fue   A137150LVIDEDNQDDLTDEEEE-TTT-HHHHHHxbbbaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ag9_A_1421ag9   A     FMNFLAVIN MONONUCLEOTIDE I - 144
1ag9_A_1421ag9   A     FMNFLAVIN MONONUCLEOTIDE E - 146
1ag9_A_1421ag9   A     CACALCIUM ION E - 146
1ag9_A_1421ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL E - 146
1ag9_A_1421ag9   A     FMNFLAVIN MONONUCLEOTIDE D - 147
1ag9_A_1421ag9   A     CACALCIUM ION P - 150
1ag9_A_1421ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL P - 150
1ag9_A_1421ag9   A     CACALCIUM ION T - 153
1ag9_A_1421ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 153
1ag9_A_1421ag9   A     CACALCIUM ION A - 154
1ag9_A_1421ag9   A     BTB2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL A - 154
1c0a_A_431c0a   A     QUO2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE Q - 46
1c0a_A_431c0a   A     QUO2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE F - 48
1c0a_A_431c0a   A     QUO2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE D - 50
1c0a_A_431c0a   A     QUO2-AMINO-7-DEAZA-(2'',3''-DIHYDROXY-CYCLOPENTYLAMINO)-GUANOSINE-5'-MONOPHOSPHATE P - 51
1fue_A_1371fue   A     FMNFLAVIN MONONUCLEOTIDE I - 139
1fue_A_1371fue   A     FMNFLAVIN MONONUCLEOTIDE E - 141
1fue_A_1371fue   A     FMNFLAVIN MONONUCLEOTIDE D - 142

Clusters included in this Subclass
CLUSTER: EH.5.403