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Information on SUBCLASS 1.1.10
Subclass Accession number: 2639
Subclass: 1.1.10 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 39

Average sequence ID (%) : 10.1 +/- 13.6
Average RMSD (Å) : 0.497 +/- 0.172

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: hhXXX
(φψ)-conformation: bbpaa
Pattern: x[acfilmtv][acfgilmptv][acgilptv]xxxx[afiklmtv]xx[afgikltv]x
Conservation:0.1252.496-0.3300.116-0.8510.111-0.368-0.1700.917-0.984-1.5680.661-0.155
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b7g_O_501b7g   O5061.IYVPQQSIKKFE.EE--GGGHHHHH.bbbpaaaaaaaa
1bg6_*_781bg6   -8092LIVVPAIHHASIAEE-S-GGGHHHHHbbbbxaaaaaaaa
1bpy_A_2531bpy   A257269IRLIPKDQYYCGVEEE--GGGHHHHHbbxbpaaaaaaaa
1ekk_A_191ekk   A2133HSITNNVVTNFTAEEE--TTSHHHHHxbbbxaaaaaaaa
1f7u_A_3661f7u   A368380IYVIASQQDLHAAEEE--GGGHHHHHbbxbpaaaaaaaa
1i36_A_591i36   A6173ISAVTPGVALGAAEE-S-GGGHHHHHbxbFbaaaaaaaa
1i6l_A_1401i6l   A140152IVPVGEDQKQHIEEEE--GGGHHHHHbbxbxaaaaaaaa
1iuj_A_21iuj   A719RIPVRPEYAEQFEEE-B-GGGHHHHHxbwxxaaaaaaaa
1iz9_A_361iz9   A3951QLLEIPQAMKALEEEE--GGGHHHHHbxbbxaaaaaaaa
1j7x_A_2811j7x   A281292.AIVLADEALDKA.EE--GGGHHHHH.bxbxaaaaaaaa
1jcl_A_451jcl   A4557AICIYPRFIPIAREEE--GGGHHHHHbbbbxaaaaaaaa
1jms_A_4281jms   A435447LVMCPYDRRAFALEEE--GGGHHHHHbbbbxaaaaaaaa
1jql_B_21jql   B213.IRLYPEQLRAQL.EE--GGGHHHHH.xbbpaaaaaaaa
1kkh_A_2851kkh   A288300IILVNEEKEKELLEEE--GGGHHHHHbbxxbaaaaaaaa
1kv5_A_381kv5   A4052VVASTFVHLAMTKEEE--GGGHHHHHbbbxxaaaaaaaa
1m0s_A_1321m0s   A133145PVEVIPMARSQVGEEEE-GGGHHHHHwbxbpaaaaaaaa
1mo0_A_361mo0   A3951VVAPPAPYLAYAKEEE--GGGHHHHHbbbwxaaaaaaaa
1ney_A_361ney   A3951VICPPATYLDYSVEEE--GGGHHHHHbbbwwaaaaaaaa
1nns_A_821nns   A8496VITHGTDTMEETAEEE--SSSHHHHHbbxbxaaaaaaaa
1nyt_A_331nyt   A3547RVLAPINDFINTLEEE--TT-HHHHHbbxxwaaaaaaaa
1o5x_A_371o5x   A4052VVFPVSVHYDHTREEE--GGGHHHHHbbbxpaaaaaaaa
1o6z_A_481o6z   A5062VFVDIPDKEDDTVEEE--GGGHHHHHbxbbxaaaaaaaa
1o7j_A_881o7j   A90102VITHGTDTVEESAEEE--STTHHHHHbbxbxaaaaaaaa
1oi4_A_1411oi4   A141153KLTAVKPIIIDVKEE---GGGHHHHHxbbbxaaaaaaaa
1q52_A_2311q52   A231243NAVAEHAELETVGEEE-GGGHHHHHHabbbpaaaaaaaa
1qop_B_121qop   B1426GMYVPQILMPALNEEES-GGGHHHHHebxbwaaaaaaaa
1r2r_A_371r2r   A4052VCAPPTAYIDFAREEE--GGGHHHHHbbbxpaaaaaaaa
1r9c_A_691r9c   A7183AFKIDDADFDRYAEEE--GGGHHHHHbbxbxaaaaaaaa
1ro7_A_441ro7   A4759AVFYNPSLFFEQYEEE--GGGHHHHHbbbbxaaaaaaaa
1rzt_A_4871rzt   A491503IIVVPYSEFACALEEE--GGGHHHHHbbbbxaaaaaaaa
1s4n_A_1231s4n   A126138VTLVRNKELKGLLEEE--GGGHHHHHbbbbbaaaaaaaa
1tcd_A_391tcd   A4153VVAPTFLHIPMTKEEE--GGGHHHHHbbbwxaaaaaaaa
1tph_1_371tph   14052VCGAPSIYLDFAREEE--GGGHHHHHbbxxwaaaaaaaa
1ub3_A_351ub3   A3547GLCIPPSYVAWVREEE--GGGHHHHHbbbbwaaaaaaaa
1uzb_A_2031uzb   A205217IAKPAEDAVVVGAEEE--GGGHHHHHbbbwxaaaaaaaa
1v8a_A_171v8a   A1931HNITNFVVMNTTAEEE--TTTHHHHHxbbbxaaaaaaaa
4mdh_A_354mdh   A3850VLLDITPMMGVLDEEE--GGGHHHHHxbbbxaaaaaaaa
4pga_A_934pga   A95107VITHGTDTLEETAEEE--STTHHHHHbbxbxaaaaaaaa
7mdh_A_787mdh   A8193KLLGSERSFQALEEEE--GGGHHHHHbxbbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE R - 254
1bpy_A_2531bpy   A     MGMAGNESIUM ION R - 254
1bpy_A_2531bpy   A     MGMAGNESIUM ION I - 255
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE D - 256
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE D - 256
1bpy_A_2531bpy   A     MGMAGNESIUM ION D - 256
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE L - 270
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE Y - 271
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE Y - 271
1bpy_A_2531bpy   A     DOC2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE F - 272
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE F - 272
1bpy_A_2531bpy   A     MGMAGNESIUM ION F - 272
1bpy_A_2531bpy   A     DCT2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE T - 273
1ekk_A_191ekk   A     CSWCYSTEINE-S-DIOXIDE T - 24
1ekk_A_191ekk   A     CSWCYSTEINE-S-DIOXIDE N - 25
1ekk_A_191ekk   A     TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL N - 25
1ekk_A_191ekk   A     SO2SULFUR DIOXIDE N - 26
1ekk_A_191ekk   A     TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL V - 27
1ekk_A_191ekk   A     CSWCYSTEINE-S-DIOXIDE V - 28
1ekk_A_191ekk   A     TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL V - 28
1ekk_A_191ekk   A     CSWCYSTEINE-S-DIOXIDE T - 32
1f7u_A_3661f7u   A     ARGARGININE Y - 369
1f7u_A_3661f7u   A     ARGARGININE V - 370
1f7u_A_3661f7u   A     ARGARGININE I - 371
1f7u_A_3661f7u   A     ARGARGININE Q - 375
1f7u_A_3661f7u   A     ARGARGININE H - 378
1f7u_A_3661f7u   A     ARGARGININE F - 382
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 62
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 63
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 64
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 65
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 66
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 68
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 72
1i36_A_591i36   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 75
1i6l_A_1401i6l   A     MSESELENOMETHIONINE V - 141
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP V - 141
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP P - 142
1i6l_A_1401i6l   A     MSESELENOMETHIONINE V - 143
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP V - 143
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP G - 144
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP E - 145
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP D - 146
1i6l_A_1401i6l   A     MSESELENOMETHIONINE Q - 147
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP Q - 147
1i6l_A_1401i6l   A     MSESELENOMETHIONINE Q - 149
1i6l_A_1401i6l   A     MSESELENOMETHIONINE H - 150
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP H - 150
1i6l_A_1401i6l   A     MSESELENOMETHIONINE I - 151
1i6l_A_1401i6l   A     TYMTRYPTOPHANYL-5'AMP I - 151
1i6l_A_1401i6l   A     MSESELENOMETHIONINE L - 153
1i6l_A_1401i6l   A     MSESELENOMETHIONINE T - 154
1i6l_A_1401i6l   A     MSESELENOMETHIONINE F - 161
1i6l_A_1401i6l   A     MSESELENOMETHIONINE Y - 165
1iuj_A_21iuj   A     ZNZINC ION N - 6
1iuj_A_21iuj   A     ZNZINC ION F - 22
1iuj_A_21iuj   A     ZNZINC ION R - 25
1jcl_A_451jcl   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE C - 47
1jms_A_4281jms   A     MGMAGNESIUM ION R - 432
1jms_A_4281jms   A     MGMAGNESIUM ION D - 434
1jms_A_4281jms   A     MGMAGNESIUM ION W - 450
1nns_A_821nns   A     ASPASPARTIC ACID H - 87
1nns_A_821nns   A     ASPASPARTIC ACID G - 88
1nns_A_821nns   A     ASPASPARTIC ACID T - 89
1nns_A_821nns   A     ASPASPARTIC ACID D - 90
1nns_A_821nns   A     ASPASPARTIC ACID T - 91
1nyt_A_331nyt   A     DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE Y - 33
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 52
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 53
1o6z_A_481o6z   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 54
1r2r_A_371r2r   A     DMSDIMETHYL SULFOXIDE E - 38
1r9c_A_691r9c   A     MNMANGANESE (II) ION H - 69
1r9c_A_691r9c   A     MNMANGANESE (II) ION A - 71
1ro7_A_441ro7   A     MSESELENOMETHIONINE A - 47
1ro7_A_441ro7   A     MSESELENOMETHIONINE V - 48
1ro7_A_441ro7   A     MSESELENOMETHIONINE F - 49
1ro7_A_441ro7   A     MSESELENOMETHIONINE Y - 50
1ro7_A_441ro7   A     CSFCYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID Y - 50
1ro7_A_441ro7   A     MSESELENOMETHIONINE N - 51
1ro7_A_441ro7   A     CSFCYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID N - 51
1ro7_A_441ro7   A     CSFCYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID S - 53
1ro7_A_441ro7   A     CSFCYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID L - 54
1ro7_A_441ro7   A     MSESELENOMETHIONINE F - 55
1ro7_A_441ro7   A     CSFCYTIDINE-5'-MONOPHOSPHATE-3-FLUORO-N-ACETYL-NEURAMINIC ACID Q - 58
1s4n_A_1231s4n   A     GOLGLYCEROL K - 132
1s4n_A_1231s4n   A     GOLGLYCEROL E - 133
1ub3_A_351ub3   A     HPD1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE C - 37
4mdh_A_354mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 40
4mdh_A_354mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 41
4mdh_A_354mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 42
4mdh_A_354mdh   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 45
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bpy_A_2531bpy   A ACTACTIVE SITE OF NUCLEOTIDYL TRANSFER.D - 256
4pga_A_934pga   A AS1DESCRIPTION NOT PROVIDEDT - 100
4pga_A_934pga   A AS1DESCRIPTION NOT PROVIDEDD - 101

Clusters included in this Subclass
CLUSTER: EH.4.11
CLUSTER: EH.5.4
CLUSTER: EH.6.1
CLUSTER: EH.7.45