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Information on SUBCLASS 3.25.1
Subclass Accession number: 264
Subclass: 3.25.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.4 (>75 %)  1.4.1 (>75 %)  1.4.1.3 (>75 %)  
GO : GO:0004353 (>75 %)  GO:0016638 (>75 %)  GO:0016639 (>75 %)  
SCOP : 51430 (>50 %)  51431 (>50 %)  53222 (>75 %)  53223 (>75 %)  53224 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 25.9 +/- 17.3
Average RMSD (Å) : 0.667 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXGXPXX
(φψ)-conformation: aalpwbb
Pattern: [AMT]x[ANT][G]x[P][AFK][ALT][FIK]
Conservation:-0.408-0.497-0.3641.538-0.3181.937-0.718-0.452-0.718
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0k_A_2641f0k   A271279AAAGLPALFHHHT--EEEaaavbwbbx
1lsh_B_13851lsh   B13851393TSNGLPKAKHHHH--EEEpUavxwbbb
1qmh_A_171qmh   A2836MITGQPFTIHHH---EEEaaavxwbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lsh_B_13851lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID I - 1394
1lsh_B_13851lsh   B     UPLUNKNOWN BRANCHED FRAGMENT OF PHOSPHOLIPID A - 1396
1qmh_A_171qmh   A     CITCITRIC ACID G - 17
1qmh_A_171qmh   A     CITCITRIC ACID Q - 18
1qmh_A_171qmh   A     CITCITRIC ACID R - 21
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qmh_A_171qmh   A RB1CITRATE BINDING SITE THAT IS INTERPRETED AS A PUTATIVE RNA BINDING SITEG - 17
1qmh_A_171qmh   A RB1CITRATE BINDING SITE THAT IS INTERPRETED AS A PUTATIVE RNA BINDING SITER - 21

Clusters included in this Subclass
CLUSTER: HE.2.89