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Information on SUBCLASS 1.1.28
Subclass Accession number: 2657
Subclass: 1.1.28 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 13.4 +/- 19.0
Average RMSD (Å) : 0.682 +/- 0.227

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 315-360
Consensus Sequence: XhpXX
(φψ)-conformation: bbpaa
Pattern: x[aipv][DENRS]x[AEGNQRT]x[alpt][agknrs]
Conservation:-0.7950.1212.224-0.6940.201-0.709-0.5750.228
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d7y_A_2371d7y   A238245LANDALAREE--HHHHbpxaaaaa
1har_*_731har   -7481LVDFRELNEE-THHHHbbxaaaaa
1htp_*_741htp   -7885EVNTGLTGEE-THHHHbbxaaaaa
1mo9_A_3151mo9   A315322QPRSAELAEE--HHHHbpxaaaaa
1mu2_A_731mu2   A7481LIDFRELNEE-THHHHbxxaaaaa
1o94_A_6441o94   A645652HSECTLWNEE--HHHHbxxaaaaa
1onl_A_741onl   A7885EVNLALEKEE-THHHHbbxaaaaa
1q1r_A_2481q1r   A249256IPNCELASEE--HHHHbxxaaaaa
1sjw_A_1151sjw   A122129WPDFQGTLEE-HHHHHbxxaaaaa
1vk3_A_631vk3   A6976IESHNHPSEEE-HHHHbbxaaaaa
3cla_*_323cla   -3845KIDITTLKEEE-HHHHbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d7y_A_2371d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 240
1d7y_A_2371d7y   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 243
1mo9_A_3151mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 317
1mo9_A_3151mo9   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 320
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE R - 644
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE E - 647
1o94_A_6441o94   A     ADPADENOSINE-5'-DIPHOSPHATE L - 650
1q1r_A_2481q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 251
1q1r_A_2481q1r   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 254
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE H - 119
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE D - 121
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE P - 123
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE D - 124
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE F - 125
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE T - 128
1sjw_A_1151sjw   A     NGVMETHYL 5,7-DIHYDROXY-2-METHYL-4,6,11-TRIOXO-3,4,6,11-TETRAHYDROTETRACENE-1-CARBOXYLATE L - 129
1vk3_A_631vk3   A     MSESELENOMETHIONINE A - 66
1vk3_A_631vk3   A     MSESELENOMETHIONINE F - 67
1vk3_A_631vk3   A     MSESELENOMETHIONINE K - 68

Clusters included in this Subclass
CLUSTER: EH.1.32