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PDB code:

Information on SUBCLASS 1.1.38

Subclass Accession number: 2667 Subclass: 1.1.38 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 5 Average sequence ID (%) : 12.9 +/- 20.8 Average RMSD (Å) : 0.500 +/- 0.200 Consensus geometry d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ag9_A_61	1ag9	A	61	67	EAQCDWD	EE-HHHH	xxpaaaa
1kyq_A_38	1kyq	A	45	51	DLHKSII	EE-TTHH	bbpaaaa
1lfk_A_17	1lfk	A	17	23	DPADELL	EE-HHHH	bxpaaaa
1obo_A_1061	1obo	A	1061	1067	ELQSDWE	EE-HHHH	bxxaaaa
1vdw_A_189	1vdw	A	196	202	YLRPTDI	EE-HHHH	axbaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ag9_A_61	1ag9	A	FMNFLAVIN MONONUCLEOTIDE	E - 61
1ag9_A_61	1ag9	A	CACALCIUM ION	E - 61
1ag9_A_61	1ag9	A	FMNFLAVIN MONONUCLEOTIDE	Q - 63
1ag9_A_61	1ag9	A	CACALCIUM ION	C - 64
1ag9_A_61	1ag9	A	CACALCIUM ION	D - 67
1ag9_A_61	1ag9	A	CACALCIUM ION	D - 68
1kyq_A_38	1kyq	A	MSESELENOMETHIONINE	L - 39
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	V - 42
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	S - 43
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	P - 44
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	D - 45
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	L - 46
1kyq_A_38	1kyq	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	H - 47
1kyq_A_38	1kyq	A	MSESELENOMETHIONINE	F - 54
1obo_A_1061	1obo	A	FMNFLAVIN MONONUCLEOTIDE	E - 1061
1obo_A_1061	1obo	A	FMNFLAVIN MONONUCLEOTIDE	Q - 1063
1vdw_A_189	1vdw	A	EGLETHYLENE GLYCOL	R - 194
1vdw_A_189	1vdw	A	EGLETHYLENE GLYCOL	Y - 196
1vdw_A_189	1vdw	A	EGLETHYLENE GLYCOL	L - 197
1vdw_A_189	1vdw	A	EGLETHYLENE GLYCOL	D - 201

Clusters included in this Subclass

CLUSTER: EH.2.128

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