Information on SUBCLASS 4.1.2 |
Subclass Accession number: 267
Subclass: 4.1.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 29 Average sequence ID (%) : 12.8 +/- 14.2 Average RMSD (Å) : 0.734 +/- 0.317 Consensus geometry
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Consensus Sequence: | pXXXpXXh |
(φψ)-conformation: | aabaapbb |
Pattern: | [adegknqrt] | [afilvw] | x | [ehknqrsty] | x | x | [eknpr] | [dehknqst] | x | x | [afgilmpvy] | x |
Conservation: | -0.879 | 0.415 | -0.126 | 0.175 | -0.895 | -0.870 | 2.010 | 1.287 | -1.185 | -0.858 | 0.768 | 0.156 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b3t_A_514 | 1b3t | A | 523 | 533 | GTALAIPQCRL. | HHHHH-TT-EE. | aaaaabaabbb. |
1b63_A_164 | 1b63 | A | 177 | 188 | RIALARFDVTIN | HHHHH-TT-EEE | aaaaabaabxbb |
1b74_A_12 | 1b74 | A | 18 | 29 | AIRNRYRKVDIV | HHHHHSSS-EEE | aaaaabaapxbb |
1cza_N_423 | 1cza | N | 430 | 441 | TLRRLVPDSDVR | HHHHH-TTEEEE | aaaaabaabbbb |
1cza_N_871 | 1cza | N | 878 | 889 | TVKELSPKCNVS | HHHHHSTTEEEE | aaaaabaabbbb |
1d2k_A_107 | 1d2k | A | 114 | 125 | LLKKNNRNLKTL | HHHHH-TT-EEE | aaaaabaaxbbb |
1f89_A_25 | 1f89 | A | 38 | 49 | RAMKEQPDTKLV | HHHHH-TTEEEE | aaaaabaaxabb |
1f9m_A_47 | 1f9m | A | 58 | 69 | KLAEEYLDVIFL | HHHHH-TTSEEE | aaaaabaabxbb |
1h7w_A_618 | 1h7w | A | 627 | 638 | ELKADFPDNIVI | HHHHH-TTSEEE | aaaaabaaxxbb |
1i36_A_92 | 1i36 | A | 97 | 108 | MASSLIEKGGFV | HHHHH-SSSEEE | aaaaaxaabxbb |
1ig8_A_211 | 1ig8 | A | 218 | 229 | ASYYTDPETKMG | HHHHH-TTEEEE | aaaaabaapabb |
1ii2_A_11 | 1ii2 | A | 17 | 27 | WALKIEKDSRL. | HHHHH-TT-EE. | aaaaaxaaxbb. |
1itz_A_509 | 1itz | A | 517 | 528 | KVAVLNRKRPSI | HHHHH-TTS-EE | aaaaaxaabxbb |
1ixc_A_105 | 1ixc | A | 112 | 123 | AFLTSTPTATVS | HHHHH-TTEEEE | aaaaabaaxbbb |
1j8m_F_228 | 1j8m | F | 234 | 245 | KFNQASKIGTII | HHHHT-TTEEEE | aaaaabaaxbbb |
1jy1_A_232 | 1jy1 | A | 240 | 251 | AQAKPYENISLC | HHHTT-TTEEEE | aaaaabaabbbb |
1jys_A_155 | 1jys | A | 160 | 171 | KIRHNFPQAIAV | HHHHH-TTEEEE | aaaaabaaxabb |
1lam_*_180 | 1lam | - | 190 | 201 | NLKSASIKTDVF | HHHHH-SSEEEE | aaaaabaabbbb |
1lld_A_93 | 1lld | A | 110 | 121 | NLVKVAPNAIYM | HHHHH-TTSEEE | aaaaabaaxxbb |
1lu4_A_1037 | 1lu4 | A | 1048 | 1059 | QVAAANPAVTFV | HHHHH-TTSEEE | aaaaabaabxxb |
1ne9_A_31 | 1ne9 | A | 31 | 42 | GWAKVKNNWEPV | HHHHHTTTSEEE | aaaaaxaabxwb |
1qzz_A_195 | 1qzz | A | 199 | 210 | AIALRAPHLRGT | HHHHH-TT-EEE | aaaaabaaxbbb |
1r26_A_37 | 1r26 | A | 42 | 53 | KIAYEFPTVKFA | HHHHH-TTSEEE | aaaaabaabxbb |
1rjd_A_112 | 1rjd | A | 114 | 125 | PLLQMFPHLAYV | HHHHH-TTEEEE | aaaaabaaxbbb |
1tib_*_111 | 1tib | - | 130 | 141 | DAVREHPDYRVV | HHHHH-TTSEEE | aaaaabaaxxbb |
1uwc_A_98 | 1uwc | A | 117 | 128 | QQASQYPDYALT | HHHHHSTTSEEE | aaaaabaaxxbb |
1v4v_A_214 | 1v4v | A | 223 | 234 | RVAEAFPHLTFV | HHHHH-TTSEEE | aaaaabaabbxb |
1vrt_A_156 | 1vrt | A | 170 | 181 | PFRKQNPDIVIY | HHHHH-TT-EEE | aaaaabaaxbbb |
3tgl_*_109 | 3tgl | - | 128 | 139 | DQFKQYPSYKVA | HHHHH-TTSEEE | aaaaabaaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uwc_A_98 | 1uwc | A | AC1NAG BINDING SITE FOR CHAIN A | G - 98 |
1uwc_A_98 | 1uwc | A | AC1NAG BINDING SITE FOR CHAIN A | I - 102 |
1uwc_A_98 | 1uwc | A | AC3NAG BINDING SITE FOR CHAIN B | I - 105 |
1uwc_A_98 | 1uwc | A | AC3NAG BINDING SITE FOR CHAIN B | D - 109 |
1uwc_A_98 | 1uwc | A | AC3NAG BINDING SITE FOR CHAIN B | Q - 110 |
Clusters included in this Subclass |
CLUSTER: HE.2.51 |
CLUSTER: HE.3.126 |
CLUSTER: HE.3.150 |
CLUSTER: HE.3.27 |
CLUSTER: HE.4.29 |
CLUSTER: HE.4.32 |
CLUSTER: HE.5.10 |
CLUSTER: HE.5.187 |