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Information on SUBCLASS 1.1.45
Subclass Accession number: 2674
Subclass: 1.1.45 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 10.4 +/- 17.0
Average RMSD (Å) : 0.675 +/- 0.126

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: hXpXX
(φψ)-conformation: bbpaa
Pattern: x[IT][DSY]xx[KRT]x[AFKV]
Conservation:-1.1291.7130.298-0.380-0.7131.0540.119-0.962
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2f_A_2251d2f   A228235LTSGSKSFEE-SHHHHbbbaaaaa
1gvn_B_621gvn   B6370VIDNDTFKEE-THHHHxbbaaaaa
1m0l_A_741m0l   A7784PIYWARYAEE-THHHHwbxaaaaa
1qqq_A_1081qqq   A108115HIDQITTVEE-HHHHHbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d2f_A_2251d2f   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 230
1d2f_A_2251d2f   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 232
1d2f_A_2251d2f   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 233
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL W - 80
1m0l_A_741m0l   A     RETRETINAL Y - 83
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL A - 84
1m0l_A_741m0l   A     RETRETINAL D - 85
1m0l_A_741m0l   A     RETRETINAL W - 86
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 87
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL F - 88
1m0l_A_741m0l   A     RETRETINAL T - 89
1m0l_A_741m0l   A     RETRETINAL T - 90
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL P - 91
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 92
1m0l_A_741m0l   A     RETRETINAL L - 93
1m0l_A_741m0l   A     LI11-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL L - 95
1qqq_A_1081qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE V - 115
1qqq_A_1081qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 116
1qqq_A_1081qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE N - 117
1qqq_A_1081qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 119
1qqq_A_1081qqq   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE K - 120

Clusters included in this Subclass
CLUSTER: EH.2.165