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Information on SUBCLASS 1.2.3
Subclass Accession number: 2701
Subclass: 1.2.3 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 40

Average sequence ID (%) : 10.1 +/- 14.7
Average RMSD (Å) : 0.450 +/- 0.150

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXpX
(φψ)-conformation: bpaaa
Pattern: x[acfgilmtv][adgnpst]x[adegknrs]x[afgiklmtv]xx[acfgilvy]
Conservation:-0.532-0.3580.453-1.1422.3940.010-0.2320.285-1.0820.204
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8h_*_2531a8h   -256265LIGKDILKPHEEEGGGHHHHbbbaaaaaaa
1ad2_*_1121ad2   -114123VATPDVMGAVEE-GGGHHHHbbxaaaaaaa
1az9_*_1061az9   -107116ALAFSEINQQEEEGGGHHHHbbxaaaaaaa
1b93_A_131b93   A1726VAHDHCKQMLEE-GGGHHHHbbxaaaaaaa
1cdo_A_3461cdo   A349358RMPLESVNDAEEEGGGHHHHbbxaaaaaaa
1cl1_A_2211cl1   A224233VCNARCWEQLEE-TTTHHHHxbxaaaaaaa
1d1t_A_3461d1t   A349358VLPFKKISEGEEEGGGHHHHbbxaaaaaaa
1dqs_A_381dqs   A4251VTDTNIGSIYEEETTTHHHHbbbaaaaaaa
1e3i_A_3481e3i   A351360ALPFESINDAEEEGGGHHHHbbxaaaaaaa
1e3j_A_3191e3j   A322331SFKLEQTVDAEEEGGGHHHHbbxaaaaaaa
1ezv_B_871ezv   B92101TFLKDDLPYYEEEGGGHHHHbbxaaaaaaa
1f8f_A_3431f8f   A345354FYAFDEINQAEEEGGGHHHHxbxaaaaaaa
1ga8_A_31ga8   A615AADDNYAAYLEE-GGGHHHHbbbaaaaaaa
1h3f_A_1901h3f   A192201MGGTDQRFNLEEEGGGHHHHxbxaaaaaaa
1het_A_3461het   A349358VLPFEKINEGEEEGGGHHHHbbxaaaaaaa
1iz0_A_1731iz0   A174183AATYAEVPEREEEGGGHHHHbbxaaaaaaa
1iz0_A_2731iz0   A276285VFPFAEAEAAEEEGGGHHHHbbxaaaaaaa
1j1u_A_1661j1u   A168177VGGMEQRKIHEEEGGGHHHHbbxaaaaaaa
1jil_A_1871jil   A191200VGGSDQWGNIEEEGGGHHHHbbxaaaaaaa
1joi_*_491joi   -5059LSSAADMPGIEEEGGGHHHHbbxaaaaaaa
1kqr_A_2051kqr   A207216IIPREEESTCEEEGGGHHHHbbxaaaaaaa
1l0l_A_951l0l   A100109KALSKDLPKAEEEGGGHHHHxbpaaaaaaa
1l0l_B_1051l0l   B110119ECLRDDVDILEEEGGGHHHHbbxaaaaaaa
1m6h_A_3451m6h   A348357NLSFDEINKAEEEGGGHHHHbbxaaaaaaa
1m6j_A_401m6j   A4554GVPFIYIPKVEE-GGGHHHHxbwaaaaaaa
1mw7_A_1721mw7   A176185RGDYNSFKLLEEEGGGHHHHbbpaaaaaaa
1n3l_A_1811n3l   A183192FGGIDQRKIFEEEGGGHHHHbbxaaaaaaa
1ne2_A_1391ne2   A142151IGNAKARDFLEEEGGGHHHHbbpaaaaaaa
1nn4_A_31nn4   A716GCDHVGFILKEE-TTTHHHHbbxaaaaaaa
1p0c_A_13441p0c   A13471356KLTLDQINKAEE-GGGHHHHbbbaaaaaaa
1p35_A_1021p35   A105114CQNGSVLKSKEEEGGGHHHHbbxaaaaaaa
1pfv_A_2881pfv   A292301FIGKDIVYFHEEEGGGHHHHxbxaaaaaaa
1pn0_A_6241pn0   A627636VTDLEGTAEIEE-TTTHHHHbbbaaaaaaa
1qkk_A_791qkk   A8291VTGHGDIPMAEE-GGGHHHHxbxaaaaaaa
1qor_A_3011qor   A301310KYPLKDAQRAEEEGGGHHHHbbxaaaaaaa
1r6t_A_3041r6t   A308317PCAIDQDPYFEEEGGGHHHHxbxaaaaaaa
1r9f_A_1191r9f   A124133SGGSRTLQHLEEEGGGHHHHbexaaaaaaa
1ujn_A_311ujn   A3443LFDRRVEGFAEEEGGGHHHHbbxaaaaaaa
1ukf_A_2311ukf   A234243QSSRSAAPQLEEETTTHHHHbbxaaaaaaa
1vj0_A_3401vj0   A341350RLPLKEANKAEEEGGGHHHHbbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b93_A_131b93   A     FMTFORMIC ACID L - 16
1b93_A_131b93   A     FMTFORMIC ACID V - 17
1b93_A_131b93   A     FMTFORMIC ACID A - 18
1b93_A_131b93   A     FMTFORMIC ACID H - 19
1b93_A_131b93   A     FMTFORMIC ACID D - 20
1b93_A_131b93   A     FMTFORMIC ACID K - 23
1b93_A_131b93   A     FMTFORMIC ACID L - 26
1cdo_A_3461cdo   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 362
1cl1_A_2211cl1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 221
1d1t_A_3461d1t   A     ZNZINC ION E - 357
1d1t_A_3461d1t   A     ZNZINC ION E - 360
1d1t_A_3461d1t   A     ZNZINC ION L - 361
1d1t_A_3461d1t   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 362
1dqs_A_381dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 44
1dqs_A_381dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 46
1dqs_A_381dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 47
1dqs_A_381dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 50
1dqs_A_381dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 51
1e3i_A_3481e3i   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE M - 364
1f8f_A_3431f8f   A     NAHNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 358
1ga8_A_31ga8   A     MSESELENOMETHIONINE I - 3
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE F - 5
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE A - 6
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE A - 7
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE D - 8
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE N - 10
1ga8_A_31ga8   A     UPFURIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUOROGALACTOSE Y - 11
1ga8_A_31ga8   A     MSESELENOMETHIONINE V - 22
1h3f_A_1901h3f   A     TYBTYROSINAL E - 191
1h3f_A_1901h3f   A     TYBTYROSINAL Q - 197
1h3f_A_1901h3f   A     TYBTYROSINAL N - 200
1j1u_A_1661j1u   A     TYRTYROSINE Q - 173
1j1u_A_1661j1u   A     TYRTYROSINE I - 176
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID Q - 190
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID V - 191
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID G - 192
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID G - 193
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID S - 194
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID D - 195
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID Q - 196
1jil_A_1871jil   A     485[2-AMINO-3-(4-HYDROXY-PHENYL)-PROPIONYLAMINO]- (3,4,5-TRIHYDROXY-6-METHYL-TETRAHYDRO-PYRAN-2-YL)- ACETIC ACID N - 199
1kqr_A_2051kqr   A     GOLGLYCEROL R - 210
1kqr_A_2051kqr   A     GOLGLYCEROL E - 213
1m6h_A_3451m6h   A     PO4PHOSPHATE ION M - 361
1ne2_A_1391ne2   A     MSESELENOMETHIONINE I - 139
1ne2_A_1391ne2   A     MSESELENOMETHIONINE Y - 140
1ne2_A_1391ne2   A     MSESELENOMETHIONINE S - 141
1ne2_A_1391ne2   A     MSESELENOMETHIONINE I - 142
1ne2_A_1391ne2   A     MSESELENOMETHIONINE G - 143
1ne2_A_1391ne2   A     MSESELENOMETHIONINE L - 151
1ne2_A_1391ne2   A     MSESELENOMETHIONINE F - 155
1p0c_A_13441p0c   A     PO4PHOSPHATE ION L - 1360
1pfv_A_2881pfv   A     2FMS-(DIFLUOROMETHYL)HOMOCYSTEINE I - 293
1pfv_A_2881pfv   A     2FMS-(DIFLUOROMETHYL)HOMOCYSTEINE I - 297
1pfv_A_2881pfv   A     2FMS-(DIFLUOROMETHYL)HOMOCYSTEINE F - 300
1pfv_A_2881pfv   A     2FMS-(DIFLUOROMETHYL)HOMOCYSTEINE H - 301
1qor_A_3011qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 314
1qor_A_3011qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 315
1r6t_A_3041r6t   A     MSESELENOMETHIONINE L - 306
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP I - 307
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP P - 308
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP C - 309
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP A - 310
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP I - 311
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP D - 312
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP Q - 313
1r6t_A_3041r6t   A     MSESELENOMETHIONINE D - 314
1r6t_A_3041r6t   A     MSESELENOMETHIONINE P - 315
1r6t_A_3041r6t   A     MSESELENOMETHIONINE Y - 316
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP Y - 316
1r6t_A_3041r6t   A     MSESELENOMETHIONINE F - 317
1r6t_A_3041r6t   A     TYMTRYPTOPHANYL-5'AMP F - 317
1r9f_A_1191r9f   A     MSESELENOMETHIONINE V - 119
1r9f_A_1191r9f   A     MSESELENOMETHIONINE S - 120
1r9f_A_1191r9f   A     MSESELENOMETHIONINE I - 121
1r9f_A_1191r9f   A     MSESELENOMETHIONINE V - 123
1r9f_A_1191r9f   A     MSESELENOMETHIONINE Q - 131
1r9f_A_1191r9f   A     MSESELENOMETHIONINE H - 132
1r9f_A_1191r9f   A     MSESELENOMETHIONINE L - 133
1r9f_A_1191r9f   A     MSESELENOMETHIONINE C - 134
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h3f_A_1901h3f   A AC6TYB BINDING SITE FOR CHAIN AE - 191
1h3f_A_1901h3f   A AC6TYB BINDING SITE FOR CHAIN AQ - 197
1h3f_A_1901h3f   A AC6TYB BINDING SITE FOR CHAIN AN - 200

Clusters included in this Subclass
CLUSTER: EH.2.32
CLUSTER: EH.3.15
CLUSTER: EH.4.18
CLUSTER: EH.5.75