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Information on SUBCLASS 1.2.5
Subclass Accession number: 2703
Subclass: 1.2.5 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 9.4 +/- 12.4
Average RMSD (Å) : 0.594 +/- 0.159

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXXXX
(φψ)-conformation: bpaaa
Pattern: x[fgilpvy]xxxx[filpvy]xx
Conservation:-1.0001.027-0.731-0.5100.858-0.5551.238-1.5830.256
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cg2_A_3911cg2   A391399YVDISAIPREEEGGGHHHbbxaaaaaa
1eyq_A_431eyq   A5361YLEDIAVASEEETTHHHHbbpaaaaaa
1f2v_A_541f2v   A5563VFSPDFVSSEE-TTHHHHbbxaaaaaa
1fo8_A_2141fo8   A215223EVAPDFFEYEE-TTHHHHbxxaaaaaa
1fwx_A_2911fwx   A293301VLDVTRFDAEEEGGGHHHbbxaaaaaa
1h5r_A_341h5r   A3441.KPMIYYPL.EETTHHHH.bwaaaaaa
1k3x_A_1071k3x   A110118MLRPEQLTTEE-TTHHHHxbxaaaaaa
1l1l_A_1441l1l   A144151.KAVSMPFS.EETTHHHH.xbaaaaaa
1ll2_A_1891ll2   A189196.LSSISIYS.EETTHHHH.xxaaaaaa
1m55_A_1451m55   A145152.VDSGYIPA.EETTHHHH.bbaaaaaa
1oac_A_681oac   A6977WVSDTFINDEE-TTHHHHbbpaaaaaa
1qg8_A_1001qg8   A101109IYMPDRLLKEE-TTHHHHbxxaaaaaa
1qlv_A_2711qlv   A271279QLHRDVPLMEE-TTHHHHbbxaaaaaa
1qni_A_2911qni   A293301VIAIDKLDDEEEGGGHHHbxxaaaaaa
1vgy_A_3551vgy   A355363NVRLNDIPKEEETTHHHHbbxaaaaaa
1zrn_*_951zrn   -95103APFSEVPDSEE-TTHHHHbwxaaaaaa
2sqc_A_6052sqc   A607615LGYTMYRHVEEETTHHHHbbxaaaaaa
8fab_B_1848fab   B191199TVPSSSLGTEE-TTHHHHbbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eyq_A_431eyq   A     SULSULFATE ANION F - 44
1eyq_A_431eyq   A     SULSULFATE ANION I - 45
1eyq_A_431eyq   A     SULSULFATE ANION K - 46
1eyq_A_431eyq   A     NARNARINGENIN F - 47
1eyq_A_431eyq   A     NARNARINGENIN T - 48
1eyq_A_431eyq   A     NARNARINGENIN A - 49
1eyq_A_431eyq   A     NARNARINGENIN I - 50
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION L - 214
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION E - 215
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION V - 216
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION F - 220
1h5r_A_341h5r   A     THMTHYMIDINE S - 42
1h5r_A_341h5r   A     THMTHYMIDINE L - 46
1k3x_A_1071k3x   A     GOLGLYCEROL E - 114
1k3x_A_1071k3x   A     GOLGLYCEROL T - 117
1k3x_A_1071k3x   A     GOLGLYCEROL T - 118
1m55_A_1451m55   A     ZNZINC ION Y - 153
2sqc_A_6052sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE F - 605
2sqc_A_6052sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE L - 607
2sqc_A_6052sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 609
2sqc_A_6052sqc   A     C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE Y - 612
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h5r_A_341h5r   A THMTHM BINDING SITE FOR CHAIN DL - 46

Clusters included in this Subclass
CLUSTER: EH.2.67
CLUSTER: EH.3.73
CLUSTER: EH.3.84
CLUSTER: EH.4.233