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Information on SUBCLASS 1.2.10
Subclass Accession number: 2708
Subclass: 1.2.10 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 69.6 +/- -23.5
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: hDhhL
(φψ)-conformation: bpaaa
Pattern: [EK][L][S][CL]x[LM][Y][Q][R][S][AC][D][ILM][FG][L][G][V][P][F][N][I][A][S][Y][AS][IL][FL][T][CH][LM][IV][A][HQ]x
Conservation:-0.605-0.005-0.005-0.573-1.995-0.5081.8980.6290.629-0.005-0.2601.264-0.922-1.550-0.0051.264-0.0051.8981.2641.264-0.005-0.005-0.0051.898-0.943-0.630-1.0100.629-0.751-0.431-0.318-0.005-0.337-1.758
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f28_A_1911f28   A191224ELSCQLYQRSCDMGLGVPFNIASYALLTCMIAHVEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHbbbbbbbbabbxaaaaaaaaaaaaaaaaaaaaaa
1j3k_C_5021j3k   C502535KLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVEEEEEEEEEEEETTTHHHHHHHHHHHHHHHHHHHbbbbbbbbabbxaaaaaaaaaaaaaaaaaaaaaa
1tsy_*_2101tsy   -210243KLSLQLYQRSADIFLGVPFNIASYALLTHLVAHEEEEEEEEEEEEETTTTHHHHHHHHHHHHHHHHHHbbbbbbbbabbxaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Q - 198
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE R - 199
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE S - 200
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 201
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE D - 202
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID D - 202
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE M - 203
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 205
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID L - 205
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE G - 206
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID G - 206
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE V - 207
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID V - 207
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID F - 209
1f28_A_1911f28   A     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE N - 210
1f28_A_1911f28   A     F89S)-2-(5(((1,2-DIHYDRO-3-METHYL-1-OXOBENZO(F)QUINAZOLIN -9-YL)METHYL)AMINO)1-OXO-2-ISOINDOLINYL)GLUTARIC ACID N - 210
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Q - 509
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE R - 510
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE S - 511
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE C - 512
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE D - 513
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 514
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 516
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE G - 517
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE V - 518
1j3k_C_5021j3k   C     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE N - 521
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE Q - 217
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE R - 218
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE S - 219
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE A - 220
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE D - 221
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE I - 222
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE L - 224
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE G - 225
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE V - 226
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE F - 228
1tsy_*_2101tsy   *     UMP2'-DEOXYURIDINE 5'-MONOPHOSPHATE N - 229

Clusters included in this Subclass
CLUSTER: EH.4.424