Information on SUBCLASS 4.2.1 |
Subclass Accession number: 271
Subclass: 4.2.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 53849 (>50 %) 53850 (>50 %) 53851 (>75 %) |
Number of loops: 39 Average sequence ID (%) : 18.8 +/- 18.9 Average RMSD (Å) : 0.431 +/- 0.147 Consensus geometry
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Consensus Sequence: | XXcphXhh |
(φψ)-conformation: | aalababb |
Pattern: | [adegknqrst] | x | [ACFILTV] | x | [adeknrst] | [DGKNR] | [adeknqrst] | [AFGILMVY] | [adegpqst] | [acfilmv] | [afgilmtv] |
Conservation: | -0.834 | -0.937 | 1.254 | -0.880 | -0.178 | 2.324 | -0.422 | 0.259 | -0.394 | 0.241 | -0.433 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a99_A_229 | 1a99 | A | 231 | 241 | NDLANGDICVA | HHHHTTS-SEE | aaaaavababb |
1amf_*_152 | 1amf | - | 157 | 167 | ALVERNEAPLG | HHHHTTSSSEE | aaaaalababb |
1atg_*_147 | 1atg | - | 152 | 162 | SQTASGAADLG | HHHHTTSSSEE | aaaaavababb |
1cb6_A_1191 | 1cb6 | A | 1197 | 1207 | KCLRDGAGDVA | HHHHTTS-SEE | aaaaavababb |
1cb6_A_1527 | 1cb6 | A | 1533 | 1543 | RCLAENAGDVA | HHHHTTS-SEE | aaaaavababb |
1dc1_A_286 | 1dc1 | A | 294 | 304 | DQLQSGSLTNS | HHHHHTSS-EE | aaaaavababb |
1drk_*_218 | 1drk | - | 222 | 232 | KAVNDGKLAAT | HHHHHTSS-EE | aaaaavababb |
1elj_A_210 | 1elj | A | 215 | 225 | SIFLEGRAPMM | HHHHTTSSSEE | aaaaavababb |
1gud_A_230 | 1gud | A | 234 | 244 | KMVEAGQMTAT | HHHHHTSS-EE | aaaaavababb |
1gv8_A_193 | 1gv8 | A | 199 | 209 | QCLKDGKGDVA | HHHHTTS-SEE | aaaaavababb |
1i6a_A_129 | 1i6a | A | 134 | 144 | AQLDSGKLDAV | HHHHHTS-SEE | aaaaagababb |
1ii5_A_54 | 1ii5 | A | 59 | 69 | TAVAEGELDIL | HHHHTTS-SEE | aaaaavababb |
1ixc_A_129 | 1ixc | A | 134 | 144 | EGLLAGTIHVG | HHHHHTS-SEE | aaaaavababb |
1jx6_A_293 | 1jx6 | A | 297 | 307 | DAIQKGDLDIT | HHHHHTSS-EE | aaaaavababb |
1lst_*_143 | 1lst | - | 148 | 158 | SDLTAGRLDAA | HHHHTTS-SEE | aaaaavababb |
1lst_*_55 | 1lst | - | 57 | 67 | PSLKAKKIDAI | HHHHTTS-SEE | aaaaavababb |
1m22_A_204 | 1m22 | A | 208 | 218 | VAVAANLASVA | HHHHTTSSSEE | aaaaalababb |
1m4j_A_11 | 1m4j | A | 18 | 28 | ARARNGKYRLL | HHHHTTT-SEE | aaaaagababb |
1mqi_A_73 | 1mqi | A | 76 | 86 | GELVYGKADIA | HHHHTTS-SEE | aaaaavababb |
1naq_A_21 | 1naq | A | 30 | 40 | KVLAEKLAACA | HHHHTTS-SEE | aaaaalababb |
1nh8_A_142 | 1nh8 | A | 142 | 152 | ISVQLGVADAI | HHHHTTS-SEE | aaaaavababb |
1nnf_A_175 | 1nnf | A | 180 | 190 | QAVENGEVPAA | HHHHTTS-SEE | aaaaavababb |
1nza_A_12 | 1nza | A | 21 | 31 | ALVEERLAACV | HHHHTTS-SEE | aaaaalababb |
1o9p_A_133 | 1o9p | A | 137 | 147 | AAVGAGMIPLA | HHHHTTS-SEE | aaaaavababb |
1oyw_A_272 | 1oyw | A | 280 | 290 | EKFQRDDLQIV | HHHHTTS-SEE | aaaaavababb |
1p99_A_78 | 1p99 | A | 80 | 90 | KALNDGDIDMN | HHHHTTSSSEE | aaaaavababb |
1pb7_A_108 | 1pb7 | A | 111 | 121 | GELLSGQADMI | HHHHHTS-SEE | aaaaagababb |
1pb7_A_206 | 1pb7 | A | 211 | 221 | QAVRDNKLHAF | HHHHTTS-SEE | aaaaavababb |
1pda_*_64 | 1pda | - | 68 | 78 | VALLENRADIA | HHHHTTS-SEE | aaaaalababb |
1ptm_A_93 | 1ptm | A | 106 | 116 | DGCLNGEFAAL | HHHHHTS-SEE | aaaaavababb |
1r9l_A_46 | 1r9l | A | 51 | 61 | TSLASGDATFT | HHHHHTSS-EE | aaaaavababb |
1ryo_A_187 | 1ryo | A | 193 | 203 | KCLKDGAGDVA | HHHHTTS-SEE | aaaaavababb |
1s14_A_1033 | 1s14 | A | 1045 | 1055 | DEALAGHAKRV | HHHHTTS-SEE | aaaaavababb |
1uiu_A_202 | 1uiu | A | 207 | 217 | VAFETGDIDLL | HHHHTTS-SEE | aaaaavababb |
1uku_A_11 | 1uku | A | 20 | 30 | TLLKERLIACA | HHHHTTS-SEE | aaaaavababb |
1urs_A_235 | 1urs | A | 240 | 250 | AEFLAGKIGMY | HHHHTT--SEE | aaaaavababb |
1us5_A_60 | 1us5 | A | 65 | 75 | NAINAGEFEMA | HHHHTTS-SEE | aaaaavababb |
1wdn_A_139 | 1wdn | A | 144 | 154 | MELGTNRADAV | HHHHTTS-SEE | aaaaavababb |
1wdn_A_53 | 1wdn | A | 55 | 65 | PALQTKNVDLA | HHHHTTSSSEE | aaaaalababb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.8 |
CLUSTER: HE.5.56 |
CLUSTER: HE.6.10 |
CLUSTER: HE.6.6 |