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Information on SUBCLASS 4.2.3
Subclass Accession number: 273
Subclass: 4.2.3 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 53849 (>75 %)  53849 (>75 %)  53850 (>75 %)  53850 (>75 %)  53851 (>75 %)  
 Number of loops: 15

Average sequence ID (%) : 14.9 +/- 15.4
Average RMSD (Å) : 0.687 +/- 0.136

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXGXhphh
(φψ)-conformation: aalababb
Pattern: x[adeknqrt]x[afilvy]xx[GKN]x[acfiv][degknrs]x[agilvy][afilmv]
Conservation:-0.738-0.105-0.556-0.052-0.685-0.0613.018-0.9470.0520.081-0.273-0.3850.650
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a99_A_2291a99   A230242INDLANGDICVAIHHHHHTTS-SEEEaaaaaavababbx
1chd_*_3141chd   -316328REAINMGGVSEVVHHHHHTT--SEEEaaaaaavababbb
1cs8_A_271cs8   A4658NQEYREGKHSFTMHHHHHTT--SEEEaaaaaavababbb
1din_*_1241din   -130142FLVAAKGYVDRAVHHHHHHT-SSEEEaaaaaavababbb
1gv1_A_101gv1   A1729FRIADKKLARELVHHHHHTT--SEEEaaaaaalababbb
1h7m_A_201h7m   A2436IQYAKMGGAKLIIHHHHHTT--SEEEaaaaaavababbb
1ixh_*_381ixh   -4254VKQIIANTVDFGAHHHHHTT-SSEEEaaaaaavababbb
1jet_A_3971jet   A401413LDTRHQGTFDVARHHHHHHT--SEEEaaaaaavababbx
1lld_A_171lld   A2436FAAAQRGIAREIVHHHHHTT--SEEEaaaaaalababbb
1o63_A_491o63   A5062PTYLVHGVADIGFHHHHHTTS-SEEEaaaaaavababbb
1pot_*_2151pot   -215227ANPYMEGEVNLGMHHHHHTTS-SEEEaaaaaalababex
1pxw_A_411pxw   A4557TKAVERGQAKLVIHHHHHTT--SEEEaaaaaavaxabbb
1q35_A_1781q35   A182194VKAIKEGICDYSIHHHHHHTS-SEEEaaaaaavababbb
1urs_A_2351urs   A239251KAEFLAGKIGMYVHHHHHTT--SEEEaaaaaavababbx
1us5_A_601us5   A6476INAINAGEFEMALHHHHHTTS-SEEEaaaaaavababbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a99_A_2291a99   A     PUT1,4-DIAMINOBUTANE I - 230
1a99_A_2291a99   A     PUT1,4-DIAMINOBUTANE W - 244
1din_*_1241din   *     CSD3-SULFINOALANINE L - 124
1din_*_1241din   *     CSD3-SULFINOALANINE G - 125
1din_*_1241din   *     CSD3-SULFINOALANINE G - 126
1din_*_1241din   *     CSD3-SULFINOALANINE A - 127
1din_*_1241din   *     CSD3-SULFINOALANINE L - 128
1din_*_1241din   *     CSD3-SULFINOALANINE Y - 144
1ixh_*_381ixh   *     PO4PHOSPHATE ION S - 38
1ixh_*_381ixh   *     PO4PHOSPHATE ION S - 39
1ixh_*_381ixh   *     PO4PHOSPHATE ION A - 54
1ixh_*_381ixh   *     PO4PHOSPHATE ION S - 55
1jet_A_3971jet   A     IUMURANYL (VI) ION D - 410
1lld_A_171lld   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 17
1lld_A_171lld   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 18
1lld_A_171lld   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 19
1lld_A_171lld   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 38
1pot_*_2151pot   *     SPDSPERMIDINE W - 229
1q35_A_1781q35   A     FMTFORMIC ACID D - 178
1q35_A_1781q35   A     FMTFORMIC ACID R - 179
1q35_A_1781q35   A     FMTFORMIC ACID D - 180
1q35_A_1781q35   A     FMTFORMIC ACID N - 196
1us5_A_601us5   A     GLUGLUTAMIC ACID S - 60
1us5_A_601us5   A     GLUGLUTAMIC ACID V - 61
1us5_A_601us5   A     GLUGLUTAMIC ACID A - 77
1us5_A_601us5   A     GLUGLUTAMIC ACID Q - 78
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1us5_A_601us5   A AC2GLU BINDING SITE FOR CHAIN AS - 60

Clusters included in this Subclass
CLUSTER: HE.4.183
CLUSTER: HE.4.65
CLUSTER: HE.5.22
CLUSTER: HE.6.42