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Information on SUBCLASS 4.2.4
Subclass Accession number: 274
Subclass: 4.2.4 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005506 (>75 %)  GO:0005506 (>75 %)  GO:0046914 (>75 %)  GO:0046914 (>75 %)  
SCOP : 53849 (>75 %)  53849 (>75 %)  53850 (>75 %)  53850 (>75 %)  53888 (>75 %)  53888 (>75 %)  
 Number of loops: 6

Average sequence ID (%) : 20.0 +/- 25.1
Average RMSD (Å) : 0.483 +/- 0.172

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpGphphh
(φψ)-conformation: aalababb
Pattern: [AGL][CFIV][akr][AEKRST][GN][AEQR][AIMT][ADR][agl][ILMTV]x[GIL]
Conservation:-0.4980.235-0.357-0.4412.8320.523-0.332-0.346-1.0310.413-0.747-0.252
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cb6_A_10421cb6   A10481059AIAENRADAVTLHHHTTS--BEEEaaaavababbxb
1cb6_A_13771cb6   A13831394LVLKGEADAMSLHHHHTS--BEEEaaaavababbxb
1gca_*_2391gca   -244255LVKSGAMAGTVLHHHHTSS-BEEEaaaavababbbx
1n62_B_4561n62   B469480AFKRGETREIMGHHHTTS-SEEEEaaaavabaxbbb
1oyw_A_1101oyw   A110121GCRTGQIRLLYIHHHHT--SEEEEaaaavababbxb
1ryo_A_451ryo   A5162AIAANEADAVTLHHHTTS--BEEEaaaavababbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oyw_A_1101oyw   A     MSESELENOMETHIONINE G - 110
1oyw_A_1101oyw   A     MSESELENOMETHIONINE C - 111
1oyw_A_1101oyw   A     MSESELENOMETHIONINE R - 112
1oyw_A_1101oyw   A     MSESELENOMETHIONINE T - 113
1oyw_A_1101oyw   A     MSESELENOMETHIONINE G - 114
1oyw_A_1101oyw   A     MSESELENOMETHIONINE Q - 115
1oyw_A_1101oyw   A     MSESELENOMETHIONINE I - 116
1oyw_A_1101oyw   A     MSESELENOMETHIONINE Y - 120
1oyw_A_1101oyw   A     MSESELENOMETHIONINE I - 121

Clusters included in this Subclass
CLUSTER: HE.5.65