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Information on SUBCLASS 2.1.7
Subclass Accession number: 2756
Subclass: 2.1.7 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 44

Average sequence ID (%) : 12.2 +/- 15.1
Average RMSD (Å) : 0.634 +/- 0.179

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: x[afgikltv]x[adgnstv]x[cdehknrst]x[adeknst]x[acgilmvy]
Conservation:-0.4381.001-0.7420.476-0.8471.480-1.4090.978-0.9760.477
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_4291a4s   A431440GVFTRDISRAEEE-S-HHHHbbbbaxaaaa
1a9x_A_6921a9x   A692701NATVTAIEMAEEE--SHHHHbbxbaxaaaa
1ad1_A_801ad1   A8291SVDTFRSEVAEEE-S-HHHHbbxbabaaaa
1aj2_*_921aj2   -94103SVDTSKPEVIEEE---HHHHbbbbaxaaaa
1aoe_A_901aoe   A9099IIHASSIESSEEEESSHHHHbbbbabaaaa
1b5t_A_1791b5t   A182191TQFFFDVESYEEE-S-HHHHxxxbabaaaa
1b78_A_111b78   A1221YFATGNPNKIEEE-S-HHHHxbxbabaaaa
1bht_A_601bht   A6170TKKVNTADQCEEE-SSHHHHbbxbabaaaa
1bxs_A_4281bxs   A430439GIFTNDIDKAEEE-S-HHHHbbbbaxaaaa
1c1d_A_371c1d   A4352AAQYSNLADAEE--SSHHHHbbxbabaaaa
1df7_A_771df7   A7785.EVVGSLEEA.EEESSHHHH.xxbabaaaa
1dxe_A_2131dxe   A214223GILAPVEADAEEE--SHHHHbbbbaxaaaa
1dxh_A_2111dxh   A212221LTLTEDPKEAEEEES-HHHHbbbbaxaaaa
1dz3_A_31dz3   A615CIADDNRELVEEE-S-HHHHbbbbaxaaaa
1euh_A_4061euh   A408417SIFTNDFPRAEEE-S-HHHHbbbbabaaaa
1eye_A_831eye   A8493SIDTMRADVAEEE-S-HHHHbbxbabaaaa
1ezv_B_2831ezv   B288297FVRDQDSAVVEEEESSHHHHbbbbaxaaaa
1f07_A_2001f07   A207216CSIDEDAAAAEEE-SSHHHHbbbbaxaaaa
1fl2_A_3421fl2   A342349..VTYCPHCD..EES-HHHH..xbabaaaa
1g0h_A_2371g0h   A237245.IVANSKEML.EEESSHHHH.bbxabaaaa
1g3q_A_1361g3q   A139148LVTNPEISCLEEE-S-HHHHxbbbabaaaa
1gqi_A_1111gqi   A115124IVAANSDVGVEEEESSHHHHbbbbabaaaa
1h6d_A_1091h6d   A113122ALVSGNAEKAEEE-S-HHHHbbbbabaaaa
1hdc_A_321hdc   A3443VLADVLDEEGEEEES-HHHHbxxbaxaaaa
1hru_A_591hru   A5968ILIAANYEQLEEEESSHHHHbbbbabaaaa
1iat_A_2411iat   A243252VALSTNTTKVEEEES-HHHHbbbbabaaaa
1jif_A_461jif   A5059ISRTEHQIVAEEE-S-HHHHbbxbabaaaa
1jqb_A_11941jqb   A11951204IGVGSRPICVEEE---HHHHxxbbapaaaa
1kbl_A_5351kbl   A537546RTNADTPEDTEEE--SHHHHbbxbabaaaa
1kgs_A_41kgs   A615LVVEDERDLAEEE-SSHHHHbbbbaxaaaa
1kz1_A_1171kz1   A121130LLTVLNEEQAEEEESSHHHHxxbbabaaaa
1l6w_A_21l6w   A413YLDTSDVVAVEEE---HHHHbbbbaxaaaa
1m6y_A_501m6y   A5261IGIDVDSEVLEEEES-HHHHbbbbaxaagg
1npy_A_1461npy   A147156KIYARNVKTGEEE-S-HHHHbbbbaxaaaa
1nqk_A_2231nqk   A230239VIVRETNDEAEEEESSHHHHbbxbabaaaa
1nqu_A_1111nqu   A115124VITADTLEQAEEEESSHHHHxxbbabaaaa
1ny5_A_21ny5   A413LVIEDDKVFREEE---HHHHbbbbaxaaaa
1o04_A_4281o04   A430439AVFTKDLDKAEEE-S-HHHHbbbbaxaaaa
1o20_A_3391o20   A341350SILTENYSNAEEE-S-HHHHbbbbabaaaa
1onr_A_131onr   A1524VADTGDIAAMEEESS-HHHHbxbbaxaaaa
1rvv_1_1111rvv   1115124IVTTENIEQAEEEESSHHHHxxbbabaaaa
1set_A_2741set   A282291VLTEASLEASEEE-S-HHHHbbbxabaaaa
1trb_*_1321trb   -132139..VSACATSD..EES-HHHH..bbabaaaa
1v93_A_1761v93   A179188TQLFFNNAHYEEE-SSHHHHxxxbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ad1_A_801ad1   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL K - 96
1aj2_*_921aj2   *     2PH[7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE D - 96
1aoe_A_901aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 93
1aoe_A_901aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 94
1aoe_A_901aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 95
1aoe_A_901aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 96
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 181
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 182
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 183
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 184
1c1d_A_371c1d   A     PHEPHENYLALANINE A - 38
1c1d_A_371c1d   A     PHEPHENYLALANINE G - 39
1c1d_A_371c1d   A     PHEPHENYLALANINE G - 40
1c1d_A_371c1d   A     PHEPHENYLALANINE T - 41
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 42
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 59
1c1d_A_371c1d   A     PHEPHENYLALANINE M - 63
1c1d_A_371c1d   A     PHEPHENYLALANINE K - 66
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 66
1c1d_A_371c1d   A     PHEPHENYLALANINE M - 67
1df7_A_771df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 79
1df7_A_771df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 80
1df7_A_771df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 81
1df7_A_771df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 82
1dxe_A_2131dxe   A     PO4PHOSPHATE ION L - 216
1eye_A_831eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE D - 86
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID Y - 204
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID T - 205
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 206
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 207
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID V - 223
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID I - 227
1fl2_A_3421fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 344
1fl2_A_3421fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 345
1fl2_A_3421fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 348
1fl2_A_3421fl2   A     FADFLAVIN-ADENINE DINUCLEOTIDE D - 349
1g3q_A_1361g3q   A     ADPADENOSINE-5'-DIPHOSPHATE V - 140
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL Y - 126
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL G - 127
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL F - 129
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL H - 130
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL R - 133
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 115
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 116
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 117
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 118
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 121
1jif_A_461jif   A     BLMBLEOMYCIN A2 R - 47
1jif_A_461jif   A     BLMBLEOMYCIN A2 H - 49
1jif_A_461jif   A     BLMBLEOMYCIN A2 S - 51
1jif_A_461jif   A     BLMBLEOMYCIN A2 R - 52
1jif_A_461jif   A     BLMBLEOMYCIN A2 T - 53
1jif_A_461jif   A     BLMBLEOMYCIN A2 A - 59
1kgs_A_41kgs   A     MSESELENOMETHIONINE L - 6
1kgs_A_41kgs   A     MSESELENOMETHIONINE V - 8
1kgs_A_41kgs   A     MSESELENOMETHIONINE E - 9
1kgs_A_41kgs   A     MSESELENOMETHIONINE D - 10
1kgs_A_41kgs   A     SCNTHIOCYANATE ION L - 17
1kgs_A_41kgs   A     SCNTHIOCYANATE ION E - 20
1kgs_A_41kgs   A     MSESELENOMETHIONINE A - 21
1kgs_A_41kgs   A     SCNTHIOCYANATE ION A - 21
1kgs_A_41kgs   A     MSESELENOMETHIONINE L - 22
1kgs_A_41kgs   A     SCNTHIOCYANATE ION L - 22
1kgs_A_41kgs   A     MSESELENOMETHIONINE K - 23
1kgs_A_41kgs   A     MSESELENOMETHIONINE K - 24
1kgs_A_41kgs   A     SCNTHIOCYANATE ION K - 24
1l6w_A_21l6w   A     GOLGLYCEROL D - 6
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 54
1m6y_A_501m6y   A     MSESELENOMETHIONINE D - 55
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 55
1m6y_A_501m6y   A     MSESELENOMETHIONINE V - 56
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 56
1m6y_A_501m6y   A     MSESELENOMETHIONINE D - 57
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 57
1m6y_A_501m6y   A     MSESELENOMETHIONINE S - 58
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 60
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE I - 111
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE T - 112
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE F - 113
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE G - 114
1nqu_A_1111nqu   A     PO4PHOSPHATE ION T - 117
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 439
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL N - 440
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Y - 441
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL L - 442
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL S - 443
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Q - 444
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 445
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE V - 111
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE I - 112
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE F - 113
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE G - 114
1rvv_1_1111rvv   1     PO4PHOSPHATE ION T - 118
1rvv_1_1111rvv   1     PO4PHOSPHATE ION Q - 123
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE Q - 274
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE F - 275
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE K - 277
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE V - 278
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE E - 279
1trb_*_1321trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE S - 133
1trb_*_1321trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE A - 134
1trb_*_1321trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE C - 135
1trb_*_1321trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE S - 138
1trb_*_1321trb   *     FADFLAVIN-ADENINE DINUCLEOTIDE D - 139
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 178
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 179
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 180
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 181
1v93_A_1761v93   A     DOXDIOXANE R - 194
1v93_A_1761v93   A     DOXDIOXANE R - 197
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gqi_A_1111gqi   A AC4EDO BINDING SITE FOR CHAIN AH - 130
1gqi_A_1111gqi   A AC2EDO BINDING SITE FOR CHAIN AR - 133
1h6d_A_1091h6d   A AC1NDP BINDING SITE FOR CHAIN AS - 116

Clusters included in this Subclass
CLUSTER: EH.1.41
CLUSTER: EH.2.23
CLUSTER: EH.3.218
CLUSTER: EH.3.26