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Information on SUBCLASS 2.1.9
Subclass Accession number: 2758
Subclass: 2.1.9 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 31

Average sequence ID (%) : 11.5 +/- 14.6
Average RMSD (Å) : 0.644 +/- 0.226

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XhXpXX
(φψ)-conformation: bbabaa
Pattern: xxx[adgpstv][adgknqrst][dgnst]xx[adeknqrst][afiklv]x
Conservation:-0.153-0.315-0.8020.381-0.2652.642-0.912-0.4680.5560.147-0.811
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dlj_A_3621dlj   A362371.VLVNDLENFK.EE---HHHHH.bxbaxaaaaa
1eix_A_171eix   A2030ALDYHNRDDALEE--SSHHHHHxxbbabaaaaa
1ex2_A_51ex2   A616ILASQSPRRKEEE----HHHHHbxxbaxaaaaa
1f0x_A_481f0x   A4959VVFPGSLLELWEE--SSHHHHHbbbxabaaaaa
1ff3_C_1361ff3   C137147AIYPLTPEQDAEE--SSHHHHHbbbwabaaaaa
1ffv_C_71ffv   C818YHAPKSVGEAVEE--SSHHHHHbbbxabaaaaa
1fo8_A_3851fo8   A387397RVQYTGRDSFKEEE--SHHHHHbbxbabaaaaa
1fvg_A_1581fvg   A158168AIYPTSAEHVGEE--SSHHHHHbbbxabaaaaa
1g71_A_481g71   A5060KNQYSDIRDLEEE--SSHHHHHlxbbabaaaaa
1g8l_A_2931g8l   A295305CGLPGNPVSATEE--SSHHHHHbbbxaxaaaaa
1gqn_A_1681gqn   A172182AVMPQSKHDVLEE--SSHHHHHbbxxabaaaaa
1gqn_A_171gqn   A2131SLMGRDINSVKEE--SSHHHHHbbbbabaaaaa
1gve_A_2801gve   A282292ILGMSSLEQLEEE--SSHHHHHxxbbabaaaaa
1i3c_A_1161i3c   A118128LTKSRNLKDLFEE--SSHHHHHbxxxaxaaaaa
1itw_A_3701itw   A374384KAVIPDRCYAGEEE--SHHHHHxxxbaxaaaaa
1je6_A_1261je6   A127137STVPQSSRAQTEE--S-HHHHHbbbpabaaaaa
1jsm_A_1721jsm   A178188IHHPNDAAEQTEEE-SSHHHHHbxbxabaaaaa
1k68_A_1181k68   A120130ITKSANLSQLFEE--SSHHHHHbxxxaxaaaaa
1l8a_A_6551l8a   A657667SYDPAYAYEVAEE--SSHHHHHbbbxabaaaaa
1m6d_A_1091m6d   A111121VELSQNEQKLAEE--S-HHHHHbbxxaxaaaaa
1n62_C_71n62   C818YHRPKSIADAVEE--SSHHHHHbbbxabaaaaa
1ofu_X_1021ofu   X104114LLQAKDNAAALEE--SSHHHHHbbxbabaaaaa
1qlt_A_731qlt   A7484IVAPRNVADVQEE--SSHHHHHbbbxabaaaaa
1qq9_A_1701qq9   A170180FVYDDDPVIEKEE--SSHHHHHbbxbFpaaaaa
1rvx_A_1751rvx   A182192IHHPPNSKEQQEEE-SSHHHHHbxbpabaaaaa
1sdo_A_741sdo   A8090YYVTADPKLIREEE-S-HHHHHbbxbaxaaaaa
1su4_A_3311su4   A331340.AIVRSLPSVE.EE---THHHH.bxbaxaaaaa
1uwv_A_3831uwv   A385395VYVSCNPATLAEE--S-HHHHHbbbbabaaaaa
1v33_A_481v33   A5060KNQYTDIRDLEEE--SSHHHHHvxbbabaaaaa
2reb_*_1152reb   -116126CSQPDTGEQALEE--SSHHHHHbbbxabaaaaa
2viu_A_1762viu   A182192IHHPSTNQEQTEEE-SSHHHHHbxbxabaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eix_A_171eix   A     BMQ1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID A - 20
1eix_A_171eix   A     BMQ1-(5'-PHOSPHO-BETA-D-RIBOFURANOSYL)BARBITURIC ACID D - 22
1ex2_A_51ex2   A     PO4PHOSPHATE ION A - 8
1ex2_A_51ex2   A     PO4PHOSPHATE ION S - 9
1ex2_A_51ex2   A     SUCSUCROSE Q - 10
1ex2_A_51ex2   A     PO4PHOSPHATE ION Q - 10
1ex2_A_51ex2   A     PO4PHOSPHATE ION S - 11
1ex2_A_51ex2   A     PO4PHOSPHATE ION R - 14
1f0x_A_481f0x   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 58
1fvg_A_1581fvg   A     MSESELENOMETHIONINE A - 158
1fvg_A_1581fvg   A     MSESELENOMETHIONINE Y - 160
1fvg_A_1581fvg   A     MSESELENOMETHIONINE P - 161
1fvg_A_1581fvg   A     MSESELENOMETHIONINE T - 162
1fvg_A_1581fvg   A     MSESELENOMETHIONINE H - 166
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 282
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 283
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 284
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE M - 285
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 286
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 289
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 290
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 291
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 293
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 294
1gve_A_2801gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 297
1i3c_A_1161i3c   A     MSESELENOMETHIONINE L - 118
1i3c_A_1161i3c   A     MSESELENOMETHIONINE T - 119
1i3c_A_1161i3c   A     MSESELENOMETHIONINE K - 120
1i3c_A_1161i3c   A     MSESELENOMETHIONINE S - 121
1i3c_A_1161i3c   A     MSESELENOMETHIONINE K - 125
1i3c_A_1161i3c   A     MSESELENOMETHIONINE D - 126
1i3c_A_1161i3c   A     MSESELENOMETHIONINE L - 127
1i3c_A_1161i3c   A     MSESELENOMETHIONINE F - 128
1k68_A_1181k68   A     PHDASPARTYL PHOSPHATE K - 122
1k68_A_1181k68   A     MGMAGNESIUM ION K - 122
1qq9_A_1701qq9   A     METMETHIONINE Y - 172
1rvx_A_1751rvx   A     SIAO-SIALIC ACID H - 183
1rvx_A_1751rvx   A     SIAO-SIALIC ACID H - 184
1rvx_A_1751rvx   A     SIAO-SIALIC ACID P - 185
1rvx_A_1751rvx   A     SIAO-SIALIC ACID P - 186
1rvx_A_1751rvx   A     SIAO-SIALIC ACID E - 190
1rvx_A_1751rvx   A     GALD-GALACTOSE E - 190
1rvx_A_1751rvx   A     SIAO-SIALIC ACID L - 194
1rvx_A_1751rvx   A     SIAO-SIALIC ACID Y - 195
1uwv_A_3831uwv   A     MSESELENOMETHIONINE V - 385
1uwv_A_3831uwv   A     MSESELENOMETHIONINE Y - 386
1uwv_A_3831uwv   A     MSESELENOMETHIONINE V - 387
1uwv_A_3831uwv   A     MSESELENOMETHIONINE S - 388
1uwv_A_3831uwv   A     MSESELENOMETHIONINE P - 391
1uwv_A_3831uwv   A     MSESELENOMETHIONINE L - 394
1uwv_A_3831uwv   A     MSESELENOMETHIONINE A - 395
1uwv_A_3831uwv   A     MSESELENOMETHIONINE R - 396
1uwv_A_3831uwv   A     MSESELENOMETHIONINE D - 397
1uwv_A_3831uwv   A     MSESELENOMETHIONINE S - 398
1uwv_A_3831uwv   A     MSESELENOMETHIONINE A - 400
1uwv_A_3831uwv   A     MSESELENOMETHIONINE L - 401
1uwv_A_3831uwv   A     MSESELENOMETHIONINE L - 402
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AI - 282
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AL - 283
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AG - 284
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AS - 286
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AQ - 290
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AQ - 293
1gve_A_2801gve   A AC1NAP BINDING SITE FOR CHAIN AN - 294
1uwv_A_3831uwv   A CATCATALYTIC NUCLEOPHILEC - 389

Clusters included in this Subclass
CLUSTER: EH.3.28
CLUSTER: EH.3.82
CLUSTER: EH.4.22
CLUSTER: EH.4.227
CLUSTER: EH.4.258
CLUSTER: EH.5.16