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Information on SUBCLASS 2.4.4
Subclass Accession number: 2827
Subclass: 2.4.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 16.4 +/- 16.2
Average RMSD (Å) : 0.500 +/- 0.292

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXhppp
(φψ)-conformation: bbpbaa
Pattern: xx[ltv][AI][ET][DHRST][EKRS][DEH]x[AE][AEKLM][FLV][dkqt][AEQRS]
Conservation:-1.533-1.015-0.3790.4880.939-0.6180.5971.641-0.3891.677-0.8960.566-0.896-0.180
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bx4_A_371bx4   A3851QILAEDKHKELFDEEEE--GGGHHHHHHbbxxxaaaaaaaaa
1ckm_A_591ckm   A6174PVSIERKDFEKLKQEEE--GGGHHHHHHxbxxbaaaaaaaaa
1mk4_A_21mk4   A316IRTITSSDYEMVTSEEE--GGGHHHHHHbbxxbaaaaaaaaa
1szw_A_2331szw   A233246WFVATTEELAELQREEE--GGGHHHHHHbbbxbaaaaaaaaa
1vhs_A_21vhs   A316LRLAEHRDLEAVVAEEE--GGGHHHHHHxbxxbaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bx4_A_371bx4   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED Q - 38
1bx4_A_371bx4   A     ADNADENOSINE Q - 38
1bx4_A_371bx4   A     ADNADENOSINE I - 39
1bx4_A_371bx4   A     ADNADENOSINE L - 40
1ckm_A_591ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE P - 59
1ckm_A_591ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE N - 60
1ckm_A_591ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE P - 61
1szw_A_2331szw   A     MSESELENOMETHIONINE V - 248
1vhs_A_21vhs   A     MSESELENOMETHIONINE H - 8
1vhs_A_21vhs   A     MSESELENOMETHIONINE L - 11
1vhs_A_21vhs   A     MSESELENOMETHIONINE T - 21
1vhs_A_21vhs   A     MSESELENOMETHIONINE I - 22

Clusters included in this Subclass
CLUSTER: EH.5.173