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Information on SUBCLASS 2.5.2
Subclass Accession number: 2840
Subclass: 2.5.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 18.4 +/- 19.0
Average RMSD (Å) : 0.600 +/- 0.212

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hXGpXX
(φψ)-conformation: bbepaa
Pattern: xx[iltvy]x[AG][adknrst]x[adegknq][adegkqt][afilmtv]
Conservation:-0.435-0.7010.244-0.6532.6600.048-0.760-0.188-0.3540.139
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
174l_A_31174l   A3342LAAAADLAAAEESSS-HHHHabFxepaaaa
1agi_*_431agi   -4554TFIHGNKNDIEEE-S-HHHHbbxbexaaaa
1by9_*_2841by9   -287296VHLKGDANTLEEEES-HHHHbbbbexaaaa
1cs1_A_2991cs1   A302311FELDGDEQTLEEESS-HHHHbbxxebaaaa
1d4o_A_1601d4o   A161170AMLLGDAKKTEEEES-HHHHbxbxepaaaa
1e58_A_2231e58   A226235RYYLGNADEIEEE-S-HHHHbbxxexaaaa
1g5a_A_4461g5a   A446454.RVSGTAAAL.EEE--HHHH.bbbexaaaa
1h1d_A_1121h1d   A113122TILNGASQDLEEEES-HHHHbxbxexaaaa
1j3a_A_371j3a   A3745.VITGNREVI.EEES-HHHH.bbxexaaaa
1jj2_I_451jj2   I4553.VITGREEQI.EEES-HHHH.bbxexaaaa
1js3_A_4081js3   A411420FRLKGSDGLNEEESS-HHHHbbxpexaaaa
1mjf_A_1351mjf   A136145KLTIGDGFEFEEEES-HHHHbbbxexaaaa
1o7t_A_281o7t   A2938KLNSAKGDQLEEEE--HHHHbbbxexaaaa
1ozh_A_3181ozh   A318327VELVGDIAGTEEEES-HHHHbbbxepaaaa
1p1c_A_1081p1c   A110119VPLKGLWEEVEEEES-HHHHbwbxexaaaa
1pno_A_4451pno   A446455MMLFGDAKKMEEEES-HHHHbxbxexaaaa
1ufk_A_21ufk   A413YRLKGTLEALEEEES-HHHHbxbxexaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d4o_A_1601d4o   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 165
1d4o_A_1601d4o   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 166
1d4o_A_1601d4o   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 167
1d4o_A_1601d4o   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 168
1g5a_A_4461g5a   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 446
1h1d_A_1121h1d   A     SAMS-ADENOSYLMETHIONINE G - 117
1h1d_A_1121h1d   A     SAMS-ADENOSYLMETHIONINE A - 118
1h1d_A_1121h1d   A     SAMS-ADENOSYLMETHIONINE S - 119
1h1d_A_1121h1d   A     SAMS-ADENOSYLMETHIONINE Q - 120
1o7t_A_281o7t   A     HF5HF OXO CLUSTER HF5 K - 34
1p1c_A_1081p1c   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 114
1p1c_A_1081p1c   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 115
1p1c_A_1081p1c   A     SAHS-ADENOSYL-L-HOMOCYSTEINE W - 116
1p1c_A_1081p1c   A     SAHS-ADENOSYL-L-HOMOCYSTEINE E - 117
1pno_A_4451pno   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 450
1pno_A_4451pno   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 451
1pno_A_4451pno   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 452
1pno_A_4451pno   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 453
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7t_A_281o7t   A HF1HF5 BINDING SITE FOR CHAIN AK - 34

Clusters included in this Subclass
CLUSTER: EH.1.73
CLUSTER: EH.2.197
CLUSTER: EH.2.66
CLUSTER: EH.3.85