Information on SUBCLASS 2.5.3 |
Subclass Accession number: 2841
Subclass: 2.5.3 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 21.9 +/- 20.7 Average RMSD (Å) : 0.535 +/- 0.237 Consensus geometry
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Consensus Sequence: | hXGphX |
(φψ)-conformation: | bbepaa |
Pattern: | [fgiv] | x | [afily] | x | [G] | [dknrsy] | [afimpvy] | [ADEGNP] | x | [AGILMTV] |
Conservation: | 0.094 | -0.490 | -0.153 | -0.607 | 2.736 | -0.184 | -0.640 | 0.063 | -0.623 | -0.197 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4s_A_236 | 1a4s | A | 237 | 246 | VSFTGSVPTG | EEEES-HHHH | bbbbexaaaa |
1a7g_E_292 | 1a7g | E | 296 | 305 | IHLKGDANIL | EEEEE-HHHH | bbbbexaaaa |
1b0u_A_230 | 1b0u | A | 231 | 240 | IEEEGDPEQV | EEEEE-HHHH | xabbexaaaa |
1b5p_A_244 | 1b5p | A | 244 | 253 | GYACGPKEVI | EEEE--HHHH | bbbbepaaaa |
1by9_*_284 | 1by9 | - | 287 | 296 | VHLKGDANTL | EEEES-HHHH | bbbbexaaaa |
1c44_A_100 | 1c44 | A | 100 | 108 | .KITGNMGLA | .EEEE-HHHH | .bbbexaaaa |
1e5e_A_220 | 1e5e | A | 220 | 229 | GLICGKADLL | EEEEE-HHHH | bbbbexaaaa |
1ec6_A_53 | 1ec6 | A | 56 | 65 | VTITGSPAAT | EEEESSHHHH | bbbbexaaaa |
1j5p_A_145 | 1j5p | A | 146 | 155 | VVFEGSVEEA | EEEEE-HHHH | xabbexaaaa |
1m1n_B_366 | 1m1n | B | 367 | 376 | FALWGDPDFV | EEEE--HHHH | bbbbexaaaa |
1o04_A_240 | 1o04 | A | 241 | 250 | VAFTGSTEIG | EEEES-HHHH | bbbbexaaaa |
1ozh_A_318 | 1ozh | A | 318 | 327 | VELVGDIAGT | EEEES-HHHH | bbbxepaaaa |
1qfj_A_196 | 1qfj | A | 197 | 206 | IYIAGRFEMA | EEEES-HHHH | bbbbexaaaa |
1usg_A_196 | 1usg | A | 197 | 206 | VYYGGYYPEM | EEEES-HHHH | bbbxebaaaa |
2gsa_A_282 | 2gsa | A | 282 | 291 | GAYGGKREIM | EEEEE-HHHH | bbbbepaaaa |
2liv_*_196 | 2liv | - | 197 | 206 | VYYGGYHPEM | EEEES-HHHH | bbbxebaaaa |
3adk_*_170 | 3adk | - | 173 | 182 | VNAEGSVDDV | EE--S-HHHH | bxabexaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_244 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 244 |
1e5e_A_220 | 1e5e | A | PPJN-(HYDROXY{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)NORVALINE | G - 220 |
1e5e_A_220 | 1e5e | A | GOLGLYCEROL | R - 233 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | F - 243 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 244 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 245 |
1o04_A_240 | 1o04 | A | MGMAGNESIUM ION | S - 246 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | S - 246 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 247 |
1o04_A_240 | 1o04 | A | MGMAGNESIUM ION | I - 249 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 249 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 250 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 252 |
1o04_A_240 | 1o04 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 253 |
1qfj_A_196 | 1qfj | A | GOLGLYCEROL | F - 203 |
Clusters included in this Subclass |
CLUSTER: EH.1.43 |
CLUSTER: EH.3.68 |