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Information on SUBCLASS 2.5.3
Subclass Accession number: 2841
Subclass: 2.5.3 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 17

Average sequence ID (%) : 21.9 +/- 20.7
Average RMSD (Å) : 0.535 +/- 0.237

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXGphX
(φψ)-conformation: bbepaa
Pattern: [fgiv]x[afily]x[G][dknrsy][afimpvy][ADEGNP]x[AGILMTV]
Conservation:0.094-0.490-0.153-0.6072.736-0.184-0.6400.063-0.623-0.197
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_2361a4s   A237246VSFTGSVPTGEEEES-HHHHbbbbexaaaa
1a7g_E_2921a7g   E296305IHLKGDANILEEEEE-HHHHbbbbexaaaa
1b0u_A_2301b0u   A231240IEEEGDPEQVEEEEE-HHHHxabbexaaaa
1b5p_A_2441b5p   A244253GYACGPKEVIEEEE--HHHHbbbbepaaaa
1by9_*_2841by9   -287296VHLKGDANTLEEEES-HHHHbbbbexaaaa
1c44_A_1001c44   A100108.KITGNMGLA.EEEE-HHHH.bbbexaaaa
1e5e_A_2201e5e   A220229GLICGKADLLEEEEE-HHHHbbbbexaaaa
1ec6_A_531ec6   A5665VTITGSPAATEEEESSHHHHbbbbexaaaa
1j5p_A_1451j5p   A146155VVFEGSVEEAEEEEE-HHHHxabbexaaaa
1m1n_B_3661m1n   B367376FALWGDPDFVEEEE--HHHHbbbbexaaaa
1o04_A_2401o04   A241250VAFTGSTEIGEEEES-HHHHbbbbexaaaa
1ozh_A_3181ozh   A318327VELVGDIAGTEEEES-HHHHbbbxepaaaa
1qfj_A_1961qfj   A197206IYIAGRFEMAEEEES-HHHHbbbbexaaaa
1usg_A_1961usg   A197206VYYGGYYPEMEEEES-HHHHbbbxebaaaa
2gsa_A_2822gsa   A282291GAYGGKREIMEEEEE-HHHHbbbbepaaaa
2liv_*_1962liv   -197206VYYGGYHPEMEEEES-HHHHbbbxebaaaa
3adk_*_1703adk   -173182VNAEGSVDDVEE--S-HHHHbxabexaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5p_A_2441b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 244
1e5e_A_2201e5e   A     PPJN-(HYDROXY{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)NORVALINE G - 220
1e5e_A_2201e5e   A     GOLGLYCEROL R - 233
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 243
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 244
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 245
1o04_A_2401o04   A     MGMAGNESIUM ION S - 246
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 246
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 247
1o04_A_2401o04   A     MGMAGNESIUM ION I - 249
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 249
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 250
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE V - 252
1o04_A_2401o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 253
1qfj_A_1961qfj   A     GOLGLYCEROL F - 203

Clusters included in this Subclass
CLUSTER: EH.1.43
CLUSTER: EH.3.68