Information on SUBCLASS 4.5.2 |
Subclass Accession number: 286
Subclass: 4.5.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.7 +/- 11.4 Average RMSD (Å) : 1.400 +/- 0.346 Consensus geometry
|
Consensus Sequence: | XXpPXhXh |
(φψ)-conformation: | aapaapab |
Pattern: | [PQT] | [AS] | x | x | [ELM] | x | x | [ETW] | x | [HMV] | [GNV] | [DKQ] | x | x | x | [ANT] | [DHY] | [P] | x | [LV] | x | [ILM] | [AVW] | x |
Conservation: | -0.125 | 0.900 | -0.125 | -0.286 | -0.367 | -0.527 | -0.326 | -0.286 | -0.688 | -0.286 | -0.688 | 0.277 | -0.106 | -0.769 | -0.206 | -0.125 | 0.357 | 4.056 | -0.849 | 0.914 | -0.447 | 0.839 | -0.447 | -0.688 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cnz_A_200 | 1cnz | A | 200 | 223 | QSSILWREIVNDVAKTYPDVELAH | HHHHHHHHHHHHHHTT-TTSEEEE | aaaaaaaaaaaaaaaabaabxbbb |
1g5t_A_98 | 1g5t | A | 102 | 125 | TAACMAVWQHGKRMLADPLLDMVV | HHHHHHHHHHHHHHTT-TT-SEEE | aaaaaaaaaaaaaaaaxaaxabbb |
1jz7_A_433 | 1jz7 | A | 434 | 457 | PAMSERVTRMVQRDRNHPSVIIWS | HHHHHHHHHHHHHHTT-TTEEEEE | aaaaaaaaaaaaaaaaxaaxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g5t_A_98 | 1g5t | A | MGMAGNESIUM ION | D - 127 |
1g5t_A_98 | 1g5t | A | ATPADENOSINE-5'-TRIPHOSPHATE | D - 127 |
1jz7_A_433 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | R - 448 |
1jz7_A_433 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | N - 449 |
1jz7_A_433 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | H - 450 |
1jz7_A_433 | 1jz7 | A | DMSDIMETHYL SULFOXIDE | P - 451 |
Clusters included in this Subclass |
CLUSTER: HE.6.148 |