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Information on SUBCLASS 2.9.2
Subclass Accession number: 2861
Subclass: 2.9.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 64.8 +/- -14.3
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XXGDYS
(φψ)-conformation: bbebaa
Pattern: [KN][GKS]x[G][D][Y][S][T][AG][A][AG][Q][ITV][I][LM][P][HY][V]
Conservation:-0.646-1.528-1.7111.0931.0931.642-0.0040.545-0.697-0.004-0.8690.545-1.163-0.004-0.3801.6420.452-0.004
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dms_*_1411dms   -141158NGAGDYSTGAAQVIMPHVEEES-SSSTTHHHHHHHHbbbebaaaaaaaaaaaaa
1eu1_A_1411eu1   A141158NSSGDYSTAAAQIIMPHVEEES-SSSTTHHHHHHHHbbbebaaaaaaaaaaaaa
1tmo_*_1431tmo   -143160KKIGDYSTGAGQTILPYVEEE--SSSTTHHHHHHHHbbbebaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dms_*_1411dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE D - 145
1dms_*_1411dms   *     MM4MOLYBDENUM (IV) OXIDE D - 145
1dms_*_1411dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Y - 146
1dms_*_1411dms   *     MM4MOLYBDENUM (IV) OXIDE Y - 146
1dms_*_1411dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE S - 147
1dms_*_1411dms   *     MM4MOLYBDENUM (IV) OXIDE S - 147
1dms_*_1411dms   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 148
1dms_*_1411dms   *     MM4MOLYBDENUM (IV) OXIDE T - 148
1eu1_A_1411eu1   A     6MOMOLYBDENUM(VI) ION D - 145
1eu1_A_1411eu1   A     OXBOUND OXYGEN D - 145
1eu1_A_1411eu1   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID D - 145
1eu1_A_1411eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Y - 146
1eu1_A_1411eu1   A     6MOMOLYBDENUM(VI) ION Y - 146
1eu1_A_1411eu1   A     OXBOUND OXYGEN Y - 146
1eu1_A_1411eu1   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID Y - 146
1eu1_A_1411eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE S - 147
1eu1_A_1411eu1   A     6MOMOLYBDENUM(VI) ION S - 147
1eu1_A_1411eu1   A     OXBOUND OXYGEN S - 147
1eu1_A_1411eu1   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID S - 147
1eu1_A_1411eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE T - 148
1eu1_A_1411eu1   A     6MOMOLYBDENUM(VI) ION T - 148
1eu1_A_1411eu1   A     OXBOUND OXYGEN T - 148
1eu1_A_1411eu1   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID T - 148
1eu1_A_1411eu1   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID Q - 152
1tmo_*_1431tmo   *     2MOMOLYBDENUM (IV)OXIDE ION D - 147
1tmo_*_1431tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER Y - 148
1tmo_*_1431tmo   *     2MOMOLYBDENUM (IV)OXIDE ION Y - 148
1tmo_*_1431tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER S - 149
1tmo_*_1431tmo   *     2MOMOLYBDENUM (IV)OXIDE ION S - 149
1tmo_*_1431tmo   *     2MOMOLYBDENUM (IV)OXIDE ION T - 150
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1tmo_*_1431tmo   * MOSMOLYBDENUM COFACTOR BINDING THE MOLYBDENUM ION, ALSO LIGATED BY TWO OXO GROUPS AND OG FROM SER 149.S - 149

Clusters included in this Subclass
CLUSTER: EH.6.276