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Information on SUBCLASS 3.2.9
Subclass Accession number: 2900
Subclass: 3.2.9 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0016829 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 7.1 +/- 10.1
Average RMSD (Å) : 1.067 +/- 0.321

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXhXpXX
(φψ)-conformation: bpaapaa
Pattern: [TVW][ALV]x[IVY][PT][FGM]x[HNS][EL][AEG][ANV]x[DSY][AL]
Conservation:-0.1060.168-1.0670.8542.408-0.792-0.3811.266-0.298-0.244-0.930-1.067-0.5180.706
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e5x_A_2891e5x   A289302WVIVPGGNLGNIYAEEEEE-SSTHHHHHbbbbxaaxaaaaaa
1rlr_*_3021rlr   -303316TLFYPMWHLEVESLEEEEETTBTTHHHHbbbbpaaxaaaaaa
1vhc_A_431vhc   A4356VAEITFRSEAAADAEEEEETTSTTHHHHbbbxxaabaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e5x_A_2891e5x   A     MSESELENOMETHIONINE W - 289
1e5x_A_2891e5x   A     MSESELENOMETHIONINE V - 290
1e5x_A_2891e5x   A     MSESELENOMETHIONINE I - 291
1e5x_A_2891e5x   A     MSESELENOMETHIONINE V - 292
1e5x_A_2891e5x   A     MSESELENOMETHIONINE I - 300
1e5x_A_2891e5x   A     MSESELENOMETHIONINE Y - 301
1e5x_A_2891e5x   A     MSESELENOMETHIONINE F - 303
1e5x_A_2891e5x   A     MSESELENOMETHIONINE Y - 304
1e5x_A_2891e5x   A     MSOSELENOMETHIONINE SELENOXIDE Y - 304
1e5x_A_2891e5x   A     MSOSELENOMETHIONINE SELENOXIDE K - 305
1e5x_A_2891e5x   A     MSOSELENOMETHIONINE SELENOXIDE G - 306
1e5x_A_2891e5x   A     MSESELENOMETHIONINE F - 307
1e5x_A_2891e5x   A     MSOSELENOMETHIONINE SELENOXIDE F - 307

Clusters included in this Subclass
CLUSTER: EH.5.295