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Information on SUBCLASS 3.4.2
Subclass Accession number: 2917
Subclass: 3.4.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 22

Average sequence ID (%) : 10.6 +/- 14.4
Average RMSD (Å) : 0.627 +/- 0.212

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbappaa
Pattern: [afilvy]xxxx[adegpqst]x[adegknqrst][adegkqrs][filtvy]
Conservation:1.597-0.928-0.487-1.546-0.5861.426-0.209-0.1530.1930.693
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cmi_A_71cmi   A918KNADMSEEMQEEE-S-HHHHabbaxxaaaa
1e0c_A_1631e0c   A165174IWDARSPQEYEEE-S-HHHHbxxaxxaaaa
1elj_A_61elj   A1019IWHAMQPNELEEE---HHHHbxbaxxaaaa
1f8r_A_2891f8r   A290299VIVCTTSRAVEEE-S-HHHHbbxaxxaaaa
1gmx_A_221gmx   A2332LVDIRDPQSFEEE-S-HHHHbbbaxpaaaa
1gtr_A_1191gtr   A120129YVDELTPEQIEEE---HHHHbxxaxxaaaa
1i4j_A_31i4j   A817RYVRISPRKVEEESS-HHHHblxabpaaaa
1i8t_A_2241i8t   A227236IIYTGPIDQYEEE-S-HHHHbbbaxxaaaa
1id1_A_311id1   A3342VISNLPEDDIEEE---HHHHbbbaxxaaaa
1iuk_A_731iuk   A7483LDVFRPPSALEEE-S-HHHHbxxaxxaaaa
1j09_A_1021j09   A103112YRAFETPEELEEE---HHHHbxbapxaaaa
1kid_*_3301kid   -333342IDGVGEEAAIEEE---HHHHblxappaaaa
1m1f_A_221m1f   A2534VLIVTPAAFNEEE-S-HHHHbbxaxxaaaa
1ni9_A_1801ni9   A182191FAIPDGDVAAEEES--HHHHbxbaxxaaaa
1okg_A_1771okg   A177186ITDARSADRFEEE-S-HHHHbbbaxpaaaa
1qb0_A_4181qb0   A423432IVDCRYPYEYEEE-S-HHHHxbxaxxaaaa
1qgi_A_1131qgi   A114123LEIKDSEKVFEEE-S-HHHHbbxaxxaaaa
1qyi_A_2331qyi   A236245IATGRPYTETEE-SS-HHHHbbbaxxaaaa
1rhs_*_1771rhs   -178187LVDSRAQGRYEEE-S-HHHHbbbaxpaaaa
1rxx_A_3181rxx   A319328RREEKTFLEVEE-SS-HHHHbxxaxpaaaa
1s9r_A_3091s9r   A309318VENGLPLEGLEEE---HHHHbpbaxxaaaa
1ub4_A_281ub4   A3140AVVLSPFMYNEEE-S-HHHHbbxaxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e0c_A_1631e0c   A     EDO1,2-ETHANEDIOL L - 163
1e0c_A_1631e0c   A     EDO1,2-ETHANEDIOL A - 164
1e0c_A_1631e0c   A     EDO1,2-ETHANEDIOL I - 165
1e0c_A_1631e0c   A     CSSS-MERCAPTOCYSTEINE W - 166
1e0c_A_1631e0c   A     CSSS-MERCAPTOCYSTEINE D - 167
1e0c_A_1631e0c   A     CSSS-MERCAPTOCYSTEINE A - 168
1e0c_A_1631e0c   A     CSSS-MERCAPTOCYSTEINE R - 169
1e0c_A_1631e0c   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED S - 170
1e0c_A_1631e0c   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED P - 171
1e0c_A_1631e0c   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED Q - 172
1e0c_A_1631e0c   A     CSSS-MERCAPTOCYSTEINE E - 173
1e0c_A_1631e0c   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED E - 173
1elj_A_61elj   A     GLCGLUCOSE A - 13
1elj_A_61elj   A     GLCGLUCOSE M - 14
1elj_A_61elj   A     GLCGLUCOSE Q - 15
1elj_A_61elj   A     GLCGLUCOSE E - 18
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE E - 28
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE Y - 29
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE M - 30
1elj_A_61elj   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE A - 31
1f8r_A_2891f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 293
1f8r_A_2891f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 294
1f8r_A_2891f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 295
1f8r_A_2891f8r   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 298
1gmx_A_221gmx   A     CSSS-MERCAPTOCYSTEINE V - 24
1gmx_A_221gmx   A     CSSS-MERCAPTOCYSTEINE D - 25
1gmx_A_221gmx   A     CSSS-MERCAPTOCYSTEINE I - 26
1gmx_A_221gmx   A     CSSS-MERCAPTOCYSTEINE R - 27
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 229
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 230
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 231
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 232
1i8t_A_2241i8t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 235
1okg_A_1771okg   A     CSSS-MERCAPTOCYSTEINE T - 178
1okg_A_1771okg   A     CACALCIUM ION T - 178
1okg_A_1771okg   A     CSSS-MERCAPTOCYSTEINE D - 179
1okg_A_1771okg   A     CACALCIUM ION D - 179
1okg_A_1771okg   A     CSSS-MERCAPTOCYSTEINE A - 180
1okg_A_1771okg   A     CACALCIUM ION A - 180
1okg_A_1771okg   A     MSESELENOMETHIONINE R - 181
1okg_A_1771okg   A     CSSS-MERCAPTOCYSTEINE R - 181
1okg_A_1771okg   A     CACALCIUM ION R - 181
1okg_A_1771okg   A     SO3SULFITE ION R - 181
1okg_A_1771okg   A     MSESELENOMETHIONINE R - 185
1okg_A_1771okg   A     CSSS-MERCAPTOCYSTEINE R - 185
1okg_A_1771okg   A     SO3SULFITE ION R - 185
1qyi_A_2331qyi   A     MSESELENOMETHIONINE E - 233
1rhs_*_1771rhs   *     CSSS-MERCAPTOCYSTEINE V - 179
1rhs_*_1771rhs   *     CSSS-MERCAPTOCYSTEINE D - 180
1rhs_*_1771rhs   *     CSSS-MERCAPTOCYSTEINE S - 181
1rhs_*_1771rhs   *     CSSS-MERCAPTOCYSTEINE R - 182
1rxx_A_3181rxx   A     MSESELENOMETHIONINE I - 318
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1okg_A_1771okg   A AC2SO3 BINDING SITE FOR CHAIN AR - 185

Clusters included in this Subclass
CLUSTER: EH.2.52
CLUSTER: EH.3.38
CLUSTER: EH.4.74