Information on SUBCLASS 3.7.1 |
Subclass Accession number: 2939
Subclass: 3.7.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 19 Average sequence ID (%) : 9.6 +/- 13.2 Average RMSD (Å) : 0.747 +/- 0.214 Consensus geometry
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Consensus Sequence: | XXXhXXX |
(φψ)-conformation: | bbpbpaa |
Pattern: | x | x | x | [afilptv] | [dgnpst] | [adknrst] | x | x | [acfilw] |
Conservation: | 0.001 | -1.178 | -0.034 | 1.050 | 1.836 | -0.346 | 0.375 | -1.314 | -0.389 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bec_*_189 | 1bec | - | 195 | 203 | RLRVSATFW | EE---HHHH | bbbbxaaaa |
1c8n_A_217 | 1c8n | A | 217 | 225 | YSTIGTAAF | EE---HHHH | bxxbxaaaa |
1dto_A_57 | 1dto | A | 57 | 65 | QVVPTLAVS | EE---HHHH | bxxxpaaaa |
1ec7_A_309 | 1ec7 | A | 309 | 317 | IPLADPHFW | EEB--HHHH | bxxbxaaaa |
1ekb_B_156 | 1ekb | B | 160 | 168 | VPLLSNEKC | EEB--HHHH | bxxbxaaaa |
1fjs_A_156 | 1fjs | A | 160 | 168 | VPYVDRNSC | EEB--HHHH | bxxbpaaaa |
1gs5_A_65 | 1gs5 | A | 65 | 73 | LRVTPADQI | EE-B-HHHH | bxpbxaaaa |
1gsi_A_135 | 1gsi | A | 138 | 146 | LLAVSAELA | EE---HHHH | xxxbxaaaa |
1gvn_B_138 | 1gvn | B | 143 | 151 | VMAVPKINS | EE---HHHH | bxbbpaaaa |
1iex_A_222 | 1iex | A | 222 | 230 | NTIINREGL | EE---HHHH | bbxbxaaaa |
1iic_A_285 | 1iic | A | 286 | 294 | IQIFTKEEF | EE---HHHH | bbxxbaaaa |
1kol_A_149 | 1kol | A | 149 | 157 | LKLPDRDKA | EE-S-HHHH | bxxppaaaa |
1m6i_A_262 | 1m6i | A | 263 | 271 | TPRSLSAID | EE---HHHH | bpxbxaaaa |
1nu6_A_284 | 1nu6 | A | 286 | 294 | QITAPASML | EE---HHHH | xbxxwaaaa |
1pyt_D_859 | 1pyt | D | 860 | 868 | QPVVDYATC | EE-B-HHHH | bxpbxaaaa |
1qwr_A_95 | 1qwr | A | 96 | 104 | KVHPDDYYA | EE---HHHH | bbbxxaaaa |
1rsy_*_205 | 1rsy | - | 211 | 219 | TFKVPYSEL | EE---HHHH | bbxbxaaaa |
1sat_*_27 | 1sat | - | 27 | 35 | KDSFSNEQA | EE---HHHH | bxbbxaaaa |
1ub0_A_133 | 1ub0 | A | 133 | 141 | LVTPNRLEA | EE--BHHHH | bbbxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c8n_A_217 | 1c8n | A | CACALCIUM ION | S - 218 |
1c8n_A_217 | 1c8n | A | CACALCIUM ION | T - 219 |
1c8n_A_217 | 1c8n | A | CACALCIUM ION | I - 220 |
1ec7_A_309 | 1ec7 | A | MGMAGNESIUM ION | L - 311 |
1fjs_A_156 | 1fjs | A | GOLGLYCEROL | Y - 162 |
1fjs_A_156 | 1fjs | A | GOLGLYCEROL | V - 163 |
1fjs_A_156 | 1fjs | A | GOLGLYCEROL | D - 164 |
1fjs_A_156 | 1fjs | A | GOLGLYCEROL | R - 165 |
1gs5_A_65 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | L - 65 |
1gs5_A_65 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | R - 66 |
1gs5_A_65 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | T - 68 |
1gs5_A_65 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | I - 76 |
1gs5_A_65 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | L - 80 |
1gsi_A_135 | 1gsi | A | MGMAGNESIUM ION | S - 150 |
1gsi_A_135 | 1gsi | A | MGMAGNESIUM ION | R - 153 |
1iex_A_222 | 1iex | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 222 |
1m6i_A_262 | 1m6i | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 262 |
1qwr_A_95 | 1qwr | A | ZNZINC ION | K - 96 |
1qwr_A_95 | 1qwr | A | ZNZINC ION | H - 98 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gs5_A_65 | 1gs5 | A | NLGNLG BINDING SITE FOR CHAIN A | R - 66 |
1gs5_A_65 | 1gs5 | A | NLGNLG BINDING SITE FOR CHAIN A | L - 80 |
1gsi_A_135 | 1gsi | A | AC4SO4 BINDING SITE FOR CHAIN A | A - 154 |
Clusters included in this Subclass |
CLUSTER: EH.2.56 |
CLUSTER: EH.3.104 |
CLUSTER: EH.4.76 |