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Information on SUBCLASS 3.9.3
Subclass Accession number: 2961
Subclass: 3.9.3 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 24.6 +/- 37.7
Average RMSD (Å) : 0.900 +/- 0.163

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXXpX
(φψ)-conformation: bbaabaa
Pattern: xxxxxxxxxxxxxxxxxxxxx
Conservation:1.638-0.5170.6420.961-0.6510.426-1.1901.368-0.7860.1560.090-1.7281.704-0.382-0.2470.156-0.7861.502-1.190-0.382-0.786
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h5r_A_2231h5r   A223243AWLDTGTHQSLIEASNFIATIEEE---SHHHHHHHHHHHHHHbbbbaabaaaaaaaaaaaaaa
1iin_A_2221iin   A223243AWLDTGTHQSLIEASNFIATIEEE--SSHHHHHHHHHHHHHHbbxxaabaaaaaaaaaaaaaa
1iyk_A_831iyk   A86106STLDIDDNLQLDELYKLLYDNEE--TTSHHHHHHHHHHHHHHbxxbaaxaaaaaaaaaaaaaa
8abp_*_1358abp   -139159AITANELDTARRRTTGSMDALEEE-TTSHHHHHHHHHHHHHHbxbbaabaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h5r_A_2231h5r   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE W - 224
1h5r_A_2231h5r   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE D - 226
1h5r_A_2231h5r   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE R - 246
1iin_A_2221iin   A     UPGURIDINE-5'-DIPHOSPHATE-GLUCOSE W - 224
1iyk_A_831iyk   A     MYATETRADECANOYL-COA N - 106
8abp_*_1358abp   *     GLAALPHA D-GALACTOSE L - 145
8abp_*_1358abp   *     GLBBETA-D-GALACTOSE L - 145
8abp_*_1358abp   *     GLAALPHA D-GALACTOSE T - 147
8abp_*_1358abp   *     GLBBETA-D-GALACTOSE T - 147
8abp_*_1358abp   *     GLBBETA-D-GALACTOSE A - 148
8abp_*_1358abp   *     GLAALPHA D-GALACTOSE R - 151
8abp_*_1358abp   *     GLBBETA-D-GALACTOSE R - 151

Clusters included in this Subclass
CLUSTER: EH.4.323
CLUSTER: EH.5.307