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Information on SUBCLASS 3.9.4
Subclass Accession number: 2962
Subclass: 3.9.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 16.9
Average RMSD (Å) : 0.875 +/- 0.222

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXpXhp
(φψ)-conformation: bbaabaa
Pattern: [FKTV][IV][FV]x[ACGN][ANRT][ARS][ALP][EST][AS]x[CKLV][AEQ]
Conservation:-1.0942.1630.792-0.802-0.685-0.5090.085-0.3330.3211.401-0.977-0.8600.498
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j5p_A_511j5p   A5163TVVECASPEAVKEEEEE-S-HHHHHHbbbbaabaaaaaa
1nvm_B_721nvm   B7486FVFDATSASAHVQEEEE-S-HHHHHHbbbbaabaaaaaa
1ou0_A_1301ou0   A131143VIVIGNAPTALLEEEEESS-HHHHHHbbbbaaxaaaaaa
1s4q_A_1821s4q   A182194KVVVNRRLESACAEEEE-S-HHHHHHbbbxaabaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 54
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE C - 55
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 56
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 57
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE P - 58
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 59
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 60
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 63
1j5p_A_511j5p   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 64
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE D - 77
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 78
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 79
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 80
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 81
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 83
1nvm_B_721nvm   B     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 87
1nvm_B_721nvm   B     MPD2-METHYL-2,4-PENTANEDIOL A - 89
1nvm_B_721nvm   B     MPD2-METHYL-2,4-PENTANEDIOL L - 90
1nvm_B_721nvm   B     MPD2-METHYL-2,4-PENTANEDIOL L - 91
1nvm_B_721nvm   B     MPD2-METHYL-2,4-PENTANEDIOL Q - 93
1nvm_B_721nvm   B     MPD2-METHYL-2,4-PENTANEDIOL A - 94
1ou0_A_1301ou0   A     MSESELENOMETHIONINE S - 130
1ou0_A_1301ou0   A     MSESELENOMETHIONINE V - 131
1ou0_A_1301ou0   A     MSESELENOMETHIONINE I - 132
1ou0_A_1301ou0   A     MSESELENOMETHIONINE V - 133
1ou0_A_1301ou0   A     MSESELENOMETHIONINE A - 140
1ou0_A_1301ou0   A     MSESELENOMETHIONINE L - 141
1ou0_A_1301ou0   A     MSESELENOMETHIONINE L - 142
1ou0_A_1301ou0   A     MSESELENOMETHIONINE E - 143

Clusters included in this Subclass
CLUSTER: EH.2.196