Information on SUBCLASS 4.12.1 |
Subclass Accession number: 299
Subclass: 4.12.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>50 %) 3.2.1 (>50 %) 3.2.1.2 GO : GO:0004553 (>50 %) GO:0016160 (>50 %) GO:0016798 (>50 %) SCOP : 51445 (>50 %) 51446 (>50 %) |
Number of loops: 8 Average sequence ID (%) : 20.2 +/- 18.6 Average RMSD (Å) : 0.688 +/- 0.136 Consensus geometry
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Consensus Sequence: | XhGXpphX |
(φψ)-conformation: | aaeaaabb |
Pattern: | x | [AEKNQS] | [ADENQT] | [ailv] | [agikl] | x | [ailt] | [fhv] | [G] | [aekqs] | [DEGS] | [gkns] | [CILV] | x |
Conservation: | -0.407 | -0.046 | -0.111 | -0.195 | -0.957 | -0.719 | -0.467 | -0.127 | 3.095 | -0.459 | 0.437 | 0.350 | 0.487 | -0.881 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ax4_A_169 | 1ax4 | A | 172 | 185 | LKENIAQHGADNIV | HHHHHHHH-GGGEE | aaaaaaaaMaaaxa |
1cex_*_52 | 1cex | - | 56 | 69 | ASNLESAFGKDGVW | HHHHHHHH-TTTEE | aaaaaaaaeaaabb |
1f0x_A_10 | 1f0x | A | 13 | 26 | LNELARLVGSSHLL | HHHHHHHH-GGGEE | aaaaaaaaeaaabb |
1j5p_A_164 | 1j5p | A | 166 | 179 | ASTIGLIVGFEKVK | HHHHHHHH-GGGEE | aaaaaaaaeaaabb |
1jnr_A_153 | 1jnr | A | 158 | 171 | AEAAKMAVGEENIY | HHHHHHHH-GGGEE | aaaaaaaaMaaabb |
1jtg_B_18 | 1jtg | B | 18 | 31 | RQQVLDIAGAENCE | HHHHHHHH-GGGEE | aaaaaaaaMaaabb |
1jtg_B_97 | 1jtg | B | 97 | 110 | RAQVLATVGQGSCT | HHHHHHHH-TBSEE | aaaaaaaaeaaabb |
1qlt_A_18 | 1qlt | A | 25 | 38 | IQDIIRIVGSENVE | HHHHHHHH-GGGEE | aaaaaaaaeaaabb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ax4_A_169 | 1ax4 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | T - 190 |
1j5p_A_164 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 164 |
1j5p_A_164 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 165 |
1j5p_A_164 | 1j5p | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 168 |
1jnr_A_153 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 153 |
1jnr_A_153 | 1jnr | A | FADFLAVIN-ADENINE DINUCLEOTIDE | K - 154 |
Clusters included in this Subclass |
CLUSTER: HE.3.146 |
CLUSTER: HE.5.47 |