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Information on SUBCLASS 3.25.1
Subclass Accession number: 2999
Subclass: 3.25.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 18.1 +/- 18.0
Average RMSD (Å) : 0.625 +/- 0.126

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hXXGXXX
(φψ)-conformation: bbagpaa
Pattern: [IL]xx[ACST][G]xx[DGV][DTV]xx[AILP]
Conservation:1.109-0.618-0.3380.0352.798-0.637-0.264-0.450-0.209-0.525-0.301-0.600
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e79_D_1321e79   D132143ILVTGIKVVDLLEE--S-HHHHHHxbxavxaaaaaa
1iir_A_21iir   A516LATCGSRGDTEPEE--S-HHHHHHbbbagpaaaaaa
1j20_A_21j20   A516LAYSGGLDTSIIEE--SSHHHHHHbxbavxaaaaaa
1kic_A_31kic   A718LDHAGNLDDFVAEEE--SHHHHHHxbbavxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE L - 5
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE A - 6
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE Y - 7
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE S - 8
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE D - 12
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE T - 13
1j20_A_21j20   A     AMPADENOSINE MONOPHOSPHATE I - 16
1kic_A_31kic   A     CACALCIUM ION H - 9
1kic_A_31kic   A     CACALCIUM ION A - 10
1kic_A_31kic   A     CACALCIUM ION G - 11
1kic_A_31kic   A     CACALCIUM ION N - 12
1kic_A_31kic   A     NOSINOSINE N - 12
1kic_A_31kic   A     NOSINOSINE L - 13
1kic_A_31kic   A     CACALCIUM ION D - 14
1kic_A_31kic   A     NOSINOSINE D - 14
1kic_A_31kic   A     CACALCIUM ION D - 15
1kic_A_31kic   A     NOSINOSINE D - 15

Clusters included in this Subclass
CLUSTER: EH.4.320
CLUSTER: EH.5.186