ArchDB - Biological DataBase of Protein Loops

Grup de Recerca en Informàtica Biomèdica

Information on SUBCLASS 3.1.1

Subclass Accession number: 3
Subclass: 3.1.1
Type: AR beta-beta link
DB: ArchDB-KI

Number of loops: 4

Average sequence ID (%) : 45.0 +/- 17.6
Average RMSD (Å) : 1.08 +/- 0.70

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 90-135

rho (°): 90-135

Consensus Sequence:	TFSFPCp
(φψ)-conformation:	bbabwbb

Pattern:	[LV]	[GI]	[CF]	[KT]	[FV]	{S}	{F}	{P}	[CG]	{DQ}
Conservation:	1.025	-1.459	1.071	0.287	0.405	-0.966	-0.323	0.673	0.801	-1.514

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bdg_*_148	1bdg	-	150	159	LGFTFSFPCV	EEEEE-S-EE	xbxxbab-bx
1cza_N_150	1cza	N	150	159	VGFTFSFPCQ	EEEEE-S-EE	bbbxbxb-bx
1cza_N_597	1cza	N	598	607	LGFTFSFPCQ	EEEEE-S-EE	bbbxbxb-bx
1e0t_A_141	1e0t	A	142	151	VICKVLNNGD	EEEEE-S-EE	bxbbxabxbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bdg_*_148	1bdg	*	GLCGLUCOSE	F - 154
1bdg_*_148	1bdg	*	GLCGLUCOSE	S - 155
1bdg_*_148	1bdg	*	GLCGLUCOSE	F - 156
1bdg_*_148	1bdg	*	GLCGLUCOSE	P - 157
1cza_N_150	1cza	N	G6PALPHA-D-GLUCOSE-6-PHOSPHATE	T - 153
1cza_N_150	1cza	N	GLCGLUCOSE	F - 154
1cza_N_150	1cza	N	GLCGLUCOSE	S - 155
1cza_N_150	1cza	N	G6PALPHA-D-GLUCOSE-6-PHOSPHATE	S - 155
1cza_N_150	1cza	N	GLCGLUCOSE	F - 156
1cza_N_150	1cza	N	GLCGLUCOSE	P - 157
1cza_N_597	1cza	N	G6PALPHA-D-GLUCOSE-6-PHOSPHATE	T - 601
1cza_N_597	1cza	N	GLCGLUCOSE	F - 602
1cza_N_597	1cza	N	GLCGLUCOSE	S - 603
1cza_N_597	1cza	N	G6PALPHA-D-GLUCOSE-6-PHOSPHATE	S - 603
1cza_N_597	1cza	N	GLCGLUCOSE	F - 604
1cza_N_597	1cza	N	GLCGLUCOSE	P - 605

Clusters included in this Subclass

CLUSTER: AR.3.1