ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.12.2

Subclass Accession number: 300
Subclass: 4.12.2

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  1 (>75 %)  11 (>50 %)
GO : GO:0004601 (>50 %)  GO:0016684 (>50 %)
SCOP : 53473 (>50 %)  53474 (>50 %)  53531 (>50 %)

Number of loops: 3

Average sequence ID (%) : 20.0 +/- 24.7
Average RMSD (Å) : 0.867 +/- 0.379

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 135-180

Consensus Sequence:	pXGpXphX
(φψ)-conformation:	aaeaaaba

Pattern:	x	[AV]	[ER]	[MY]	[AV]	[EGS]	[ERS]	x	[G]	[ET]	[AEG]	[NR]	[FIL]	x	x
Conservation:	-1.053	0.117	0.488	0.676	0.117	-0.501	-0.422	-0.186	2.886	0.151	-0.659	0.597	0.050	-1.131	-1.131

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a8i_*_696	1a8i	-	696	710	NVEMAEEAGEENFFI	HHHHHHHH-GGGSEE	aaaaaaaaMaaabbx
1a8q_*_96	1a8q	-	100	114	LARYVGRHGTGRLRS	HHHHHHHH-STTEEE	aaaaaaaaeaaabab
1brt_*_101	1brt	-	104	118	VARYVSSYGTARIAK	HHHHHHHH-STTEEE	aaaaaaaaeaaabab

Clusters included in this Subclass

CLUSTER: HE.5.165