Information on SUBCLASS 4.14.2 |
Subclass Accession number: 303
Subclass: 4.14.2 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.7 (>75 %) GO : GO:0030151 (>75 %) GO:0046914 (>75 %) SCOP : 53705 (>75 %) 53706 (>75 %) 53707 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 11.1 +/- 11.4 Average RMSD (Å) : 1.225 +/- 0.287 Consensus geometry
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Consensus Sequence: | pXpXpXXX |
(φψ)-conformation: | aapappbb |
Pattern: | [AFLY] | [ACIL] | [ADE] | x | [LTV] | x | [ARS] | x | x | [DGNV] | x | [AY] | x | [EKR] | [ADES] | x | [APQS] | [ERY] | [PR] | [HLV] | [ITV] | [ILV] | [SV] | x |
Conservation: | -0.246 | -0.105 | 0.797 | -1.307 | 0.452 | -1.166 | 0.206 | -1.307 | -0.176 | -1.025 | -0.600 | 0.637 | -0.600 | 1.619 | 0.037 | -1.095 | -0.317 | 0.055 | 2.501 | -0.361 | 0.790 | 1.656 | 0.582 | -1.025 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqn_A_38 | 1dqn | A | 44 | 67 | LAADTARRMNEYYKDVAEPVTLVA | HHHHHHHHHHHHHTT-SS-EEEEE | aaaaaaaaaaaaaaapabpxxxbb |
1gs5_A_17 | 1gs5 | A | 19 | 42 | ALERLFSALVNYRESHQRPLVIVH | HHHHHHHHHHHHHTT--S-EEEEE | aaaaaaaaaaaaaaabaxxxbbbb |
1mv8_A_97 | 1mv8 | A | 98 | 121 | YIETVCREIGFAIREKSERHTVVV | HHHHHHHHHHHHHTT--S--EEEE | aaaaaaaaaaaaaaaxaxxbbbbx |
1qas_A_366 | 1qas | A | 366 | 389 | FCDVLRAIRDYAFKASPYPVILSL | HHHHHHHHHHHTTTS-SS-EEEEE | aaaaaaaaaaaaaaabaxpbbbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dqn_A_38 | 1dqn | A | MGMAGNESIUM ION | L - 68 |
1dqn_A_38 | 1dqn | A | POPPYROPHOSPHATE 2- | L - 68 |
1gs5_A_17 | 1gs5 | A | NLGN-ACETYL-L-GLUTAMATE | H - 42 |
1gs5_A_17 | 1gs5 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | H - 42 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 98 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 101 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 102 |
1mv8_A_97 | 1mv8 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 105 |
Clusters included in this Subclass |
CLUSTER: HE.7.26 |