Information on SUBCLASS 4.1.9 |
Subclass Accession number: 3037
Subclass: 4.1.9 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004553 (>50 %) GO:0016160 (>50 %) GO:0016757 (>50 %) GO:0016798 (>50 %) SCOP : 51445 (>50 %) 51446 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 12.3 +/- 15.2 Average RMSD (Å) : 0.667 +/- 0.231 Consensus geometry
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Consensus Sequence: | Xhcppppp |
(φψ)-conformation: | pppaapaa |
Pattern: | x | [DV] | [IVW] | [DN] | [KT] | [DQ] | [NS] | [DET] | [EKQ] | [AGV] | [KQW] | x | [IY] | [KL] | [KMQ] | [RSY] | [FIV] | [FKL] | [DEN] |
Conservation: | -1.000 | -0.268 | -0.456 | 1.930 | 0.385 | 1.333 | 1.041 | -0.109 | 0.702 | -1.035 | -0.456 | -1.613 | 1.119 | -0.526 | -0.224 | -1.266 | 0.123 | -1.382 | 0.702 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a26_*_799 | 1a26 | - | 802 | 820 | KVVDKDSEEAKIIKQYVKN | EE--TTSHHHHHHHHHHHH | bxxxaaxaaaaaaaaaaaa |
1bag_*_146 | 1bag | - | 146 | 163 | .DWNTQNTQVQSYLKRFLE | .EE-TT-HHHHHHHHHHHH | .xpxaaxaaaaaaaaaaaa |
1r7a_A_160 | 1r7a | A | 161 | 179 | VDIDTDSDKGWEYLMSIFD | EEB-TTSHHHHHHHHHHHH | xxxxaaxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bag_*_146 | 1bag | * | CACALCIUM ION | D - 146 |
1bag_*_146 | 1bag | * | CACALCIUM ION | W - 147 |
1bag_*_146 | 1bag | * | CACALCIUM ION | T - 149 |
1r7a_A_160 | 1r7a | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | Q - 160 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1bag_*_146 | 1bag | * | CA1CALCIUM BINDING SITE. | D - 146 |
Clusters included in this Subclass |
CLUSTER: EH.5.386 |