Information on SUBCLASS 4.2.1 |
Subclass Accession number: 3039
Subclass: 4.2.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 40 Average sequence ID (%) : 9.2 +/- 12.8 Average RMSD (Å) : 0.805 +/- 0.278 Consensus geometry
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Consensus Sequence: | hXXXXpXp |
(φψ)-conformation: | bbaappaa |
Pattern: | [acfgikltv] | [acfgiklmtv] | x | x | [adegknst] | x | [dehnprst] | x | [adegknqrst] | x | x | x |
Conservation: | 0.896 | 0.447 | -0.764 | -0.121 | 0.571 | 0.235 | 0.493 | -1.411 | 2.129 | -1.142 | -0.494 | -0.838 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a04_A_105 | 1a04 | A | 106 | 117 | YLLKDMEPEDLL | EEETT--HHHHH | bbxaaxxaaaaa |
1a4s_A_269 | 1a4s | A | 271 | 282 | LIFKDCELENAV | EE-TTS-HHHHH | bbxaaxxaaaaa |
1bs0_A_125 | 1bs0 | A | 127 | 138 | AADRLSHASLLE | EEETT--HHHHH | bbpaapxaaaaa |
1bxs_A_274 | 1bxs | A | 276 | 287 | IVFADADLDNAV | EE-TTS-HHHHH | xbxaaxxaaaaa |
1cl1_A_103 | 1cl1 | A | 105 | 116 | LMTNTAYEPSQD | EEETTS-HHHHH | bbxaaxpaaaaa |
1cs1_A_93 | 1cs1 | A | 95 | 106 | VAPHDCYGGSYR | EEETT--HHHHH | bbxaaxpaaaaa |
1e4m_M_414 | 1e4m | M | 414 | 424 | .TPGDENRNQSM | .EETTS-HHHHH | .bxaaxxaaaaa |
1e79_A_229 | 1e79 | A | 233 | 244 | SATASDAAPLQY | EE-TTS-HHHHH | bbxaaxpaaaaa |
1e79_D_215 | 1e79 | D | 219 | 230 | YGQMNEPPGARA | EE-TTS-HHHHH | bbxaaxxaaaaa |
1eg5_A_91 | 1eg5 | A | 93 | 104 | ITTPIEHKAVLE | EE-TTS-HHHHH | bbbaaxxaaaaa |
1elu_A_106 | 1elu | A | 108 | 119 | LLTDCEHPGIIA | EEETT--HHHHH | bbxaaxxaaaaa |
1euh_A_255 | 1euh | A | 258 | 269 | IVLEDADLELTA | EE-TTS-HHHHH | xbxaaxxaaaaa |
1ewk_A_254 | 1ewk | A | 260 | 271 | KIYSNAGEKSFD | EE-TT--HHHHH | bbxaaxxaaaaa |
1fc4_A_128 | 1fc4 | A | 130 | 141 | ISDALNHASIID | EEETT--HHHHH | bbxaapxaaaaa |
1g62_A_24 | 1g62 | A | 25 | 36 | LVAVGGSENFYS | EEETT--HHHHH | bbxaaxxaaaaa |
1h16_A_370 | 1h16 | A | 374 | 385 | LWSEKLPLNFKK | EE-TTS-HHHHH | xxbaaxxaaaaa |
1h7m_A_34 | 1h7m | A | 36 | 47 | IVARNARPDIKE | EEETTS-HHHHH | bbxaaxpaaaaa |
1i0r_A_61 | 1i0r | A | 66 | 77 | VLELETPMEFIG | EEBTT--HHHHH | xxxaaxxaaaaa |
1ibj_A_173 | 1ibj | A | 175 | 186 | VAGDDVYGGSDR | EEESS--HHHHH | bbpaappaaaaa |
1jx6_A_340 | 1jx6 | A | 342 | 353 | IVTKADSPERIE | EEETTS-HHHHH | xbbaaxxaaaaa |
1k3s_A_85 | 1k3s | A | 85 | 95 | .LPQTSTEEEAL | .EETTS-HHHHH | .bpaaxxaaaaa |
1kzy_C_1919 | 1kzy | C | 1921 | 1932 | VTDPSCPASVLK | EE-TT--HHHHH | bbbaaxxaaaaa |
1l6r_A_187 | 1l6r | A | 189 | 200 | ACPANATDNIKA | EE-TTS-HHHHH | bbxaaxxaaaaa |
1nbw_B_86 | 1nbw | B | 87 | 98 | TGHVTDSDDQLR | EEETTS-HHHHH | bbbaaxxaaaaa |
1o04_A_273 | 1o04 | A | 276 | 287 | IIMSDADMDWAV | EE-TTS-HHHHH | bbxaaxxaaaaa |
1o1z_A_58 | 1o1z | A | 60 | 71 | VKIRDATVSELK | EEGGGS-HHHHH | bxaaabxaaaaa |
1o20_A_227 | 1o20 | A | 230 | 241 | FVDESADLKKAV | EE-TTS-HHHHH | bxxaapxaaaaa |
1oas_A_87 | 1oas | A | 90 | 101 | TMPETMSIERRK | EEETTS-HHHHH | bbxaappaaaaa |
1od6_A_85 | 1od6 | A | 89 | 100 | GLRAVSDYEYEL | EE-TTS-HHHHH | xbbaapxaaaaa |
1oyw_A_263 | 1oyw | A | 265 | 276 | AYHAGLENNVRA | EE-TTS-HHHHH | xbbaaxxaaaaa |
1oyw_A_92 | 1oyw | A | 94 | 105 | CLNSTQTREQQL | EE-TTS-HHHHH | bbbaaxxaaaaa |
1p3w_A_96 | 1p3w | A | 98 | 109 | ITSKTEHKAVLD | EEETTS-HHHHH | bbbaaxxaaaaa |
1qop_A_153 | 1qop | A | 153 | 164 | ICPPNADDDLLR | EE-TT--HHHHH | xbxaNpxaaaaa |
1qz9_A_121 | 1qz9 | A | 123 | 134 | VTETSNFPTDLY | EEETTS-HHHHH | xbbaaxpaaaaa |
1rkd_*_137 | 1rkd | - | 139 | 150 | LMQLESPLESVM | EE-SSS-HHHHH | bbbaabpaaaaa |
1tig_*_85 | 1tig | - | 89 | 100 | RLSPTIEEHDFN | EE-TT--HHHHH | xbxaaxxaaaaa |
1uzb_A_293 | 1uzb | A | 296 | 307 | IVDETADFDLAA | EE-TTS-HHHHH | bbbaaxxaaaaa |
1vec_A_185 | 1vec | A | 187 | 198 | ATTGGTNLRDDI | EE-SSS-HHHHH | bbbaapxaaaaa |
2ncd_A_400 | 2ncd | A | 401 | 412 | VFHPLSSQSDIF | EE-TT--HHHHH | bbxaaxxaaaaa |
7a3h_A_195 | 7a3h | A | 200 | 211 | HFYAGTHGQNLR | EEETTS--HHHH | bbbaaxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1a04_A_105 | 1a04 | A | 1PHOSPHORYLATION SITE. | K - 109 |
1od6_A_85 | 1od6 | A | AC3SO4 BINDING SITE FOR CHAIN A | R - 91 |
1od6_A_85 | 1od6 | A | AC2SO4 BINDING SITE FOR CHAIN A | H - 104 |
1od6_A_85 | 1od6 | A | AC2SO4 BINDING SITE FOR CHAIN A | R - 107 |
1od6_A_85 | 1od6 | A | AC2SO4 BINDING SITE FOR CHAIN A | Q - 108 |
1rkd_*_137 | 1rkd | * | RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE. | E - 143 |
Clusters included in this Subclass |
CLUSTER: EH.3.47 |
CLUSTER: EH.4.142 |
CLUSTER: EH.4.15 |
CLUSTER: EH.5.405 |
CLUSTER: EH.6.7 |