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Information on SUBCLASS 4.15.1
Subclass Accession number: 304
Subclass: 4.15.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 53473 (>75 %)  53474 (>75 %)  
Number of loops: 10

Average sequence ID (%) : 14.4 +/- 20.4
Average RMSD (Å) : 0.850 +/- 0.292

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXXXXX
(φψ)-conformation: aalpapbb
Pattern: [ILMWY]x[dkrty]xx[EGQR][fhilvy][EKPQR]xxxx
Conservation:1.3580.355-0.3000.070-0.8311.816-0.0631.237-0.837-0.761-1.170-0.875
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aye_*_2541aye   -257268WSYDYGIKYSFAHHHHTT-SEEEEaaaaagxaxbbb
1e0c_A_2351e0c   A242253IAKALGYPRVKGHHHHTT-S-EEEaaaaavxabbbb
1e0c_A_931e0c   A101112LLDVIGQQRYHYHHHHTT---EEEaaaaavxaxbbb
1gyt_A_2951gyt   A306317MVAELQLPINVIHHHHHT-SSEEEaaaaalxabbbb
1hrk_A_3561hrk   A356367LAKECGVENIRRHHHHTT-SEEEEaaaaavxabbbb
1kwm_A_2541kwm   A257268WAYDQGIRYSFTHHHHTT-SEEEEaaaaagxabbbb
1m4l_A_2541m4l   A257268WSYNQGIKYSFTHHHHTT--EEEEaaaaavxaxbbb
1mbx_C_781mbx   C91102YARENEHPLLCTHHHHTT---EEEaaaaalbaxbbb
1qgo_A_1491qgo   A161172MMTAQRFPARVGHHHHHT-SEEEEaaaaavxabbbb
1rhs_*_1081rhs   -114125MFRVFGHRTVSVHHHHTT---EEEaaaaavbaxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e0c_A_931e0c   A     MO6MAGNESIUM ION, 6 WATERS COORDINATED W - 94
1e0c_A_2351e0c   A     CSSS-MERCAPTOCYSTEINE R - 235
1e0c_A_2351e0c   A     CSSS-MERCAPTOCYSTEINE S - 236
1e0c_A_2351e0c   A     CSSS-MERCAPTOCYSTEINE G - 237
1gyt_A_2951gyt   A     ZNZINC ION N - 325
1m4l_A_2541m4l   A     ZNZINC ION E - 270
1mbx_C_781mbx   C     GOLGLYCEROL A - 78
1mbx_C_781mbx   C     GOLGLYCEROL E - 79
1mbx_C_781mbx   C     GOLGLYCEROL A - 81
1mbx_C_781mbx   C     GOLGLYCEROL E - 82
1mbx_C_781mbx   C     GOLGLYCEROL L - 103
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1aye_*_2541aye   * 1SUBSITE S1: ARG 145, ASN 144, TYR 248 SUBSITE S1: ARG 127, GLU 270 SUBSITE S2: ARG 71, SER 197, TYR 198, SER 199 SUBSITE S3: PHE 279 SUBSITE S4: LYS 122, ARG 124, LYS 128.E - 270

Clusters included in this Subclass
CLUSTER: HE.4.45