ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.8.3

Subclass Accession number: 3080
Subclass: 4.8.3

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0000287 (>50 %) GO:0004872 (>50 %) GO:0005515 (>75 %)
SCOP : 53299 (>75 %) 53300 (>75 %) 53301 (>75 %)

Number of loops: 3

Average sequence ID (%) : 24.4 +/- 33.0
Average RMSD (Å) : 1.000 +/- 0.346

Consensus geometry

d (Å): 17

delta (°): 90-135

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	hXXXppXp
(φψ)-conformation:	bbabppaa

Pattern:	[KR]	[IV]	[AM]	[LV]	[ILV]	[LV]	[MT]	[AD]	[GS]	[EQ]	[ES]	[HP]	[DQ]	[GNR]	x	x	x	[KN]	x	[V]	x	[DQY]	x	[CQ]	[EGN]	x
Conservation:	1.395	1.374	-0.132	0.467	0.589	0.467	0.035	-0.277	0.629	1.395	0.180	0.839	0.796	-0.545	-1.061	-1.061	-0.726	0.655	-1.576	1.827	-1.180	-0.855	-1.370	0.360	-0.545	-1.680

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aox_A_246	1aox	A	247	272	KVMVVVTDGESHDGSMLKAVIDQCNH	EEEEEEESS--S-GGGHHHHHHHHHH	xbbbbbbabxxaaaaaaaaaaaaaaa
1ck4_A_250	1ck4	A	250	275	KVMVIVTDGESHDNYRLKQVIQDCED	EEEEEEESS--TTGGGHHHHHHHHHH	xbbbxbbabxxaaaaaaaaaaaaaaa
1ijb_A_615	1ijb	A	616	641	RIALLLMASQEPQRMSRNFVRYVQGL	EEEEEEE-----GGG-TTHHHHHHHH	bbbxxxbabbxpaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1aox_A_246	1aox	A	MGAMG BINDING SITE.	D - 254

Clusters included in this Subclass