Information on SUBCLASS 4.19.1 |
Subclass Accession number: 309
Subclass: 4.19.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0003779 (>75 %) GO:0005509 (>50 %) GO:0005515 (>75 %) GO:0008092 (>75 %) SCOP : 55752 (>75 %) 55753 (>75 %) 55754 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 42.9 +/- 30.8 Average RMSD (Å) : 0.667 +/- 0.208 Consensus geometry
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Consensus Sequence: | EXXGphXX |
(φψ)-conformation: | aallapbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | 0.055 | 0.915 | 0.055 | 0.055 | -0.460 | 1.086 | 0.227 | -0.460 | 0.743 | -0.976 | -0.288 | 0.055 | -1.148 | -0.804 | 2.461 | 0.227 | 1.774 | -0.804 | 0.055 | 2.461 | -0.288 | -0.117 | -1.148 | -0.804 | 0.055 | -1.148 | -0.976 | -0.804 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d0n_A_473 | 1d0n | A | 473 | 500 | QDEVAASAILTAQLDEELGGTPVQSRVV | HHHHHHHHHHHHHHHHTTTS-SEEEEEE | aaaaaaaaaaaaaaaaaagvaxxbbbbb |
1kcq_A_207 | 1kcq | A | 208 | 235 | YERLKATQVSKGIRDNERSGRARVHVSE | HHHHHHHHHHHHHHHHTSTT-SEEEEEE | aaaaaaaaaaaaaaaaaalvabbxbxbb |
1p8x_A_473 | 1p8x | A | 473 | 500 | QDEVAASAILTAQLDEELGGTPVQSRVV | HHHHHHHHHHHHHHHHHTTT-SEEEEEE | aaaaaaaaaaaaaaaaaavvaxxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kcq_A_207 | 1kcq | A | CDCADMIUM ION | E - 209 |
1kcq_A_207 | 1kcq | A | CDCADMIUM ION | R - 230 |
1kcq_A_207 | 1kcq | A | CDCADMIUM ION | V - 231 |
1kcq_A_207 | 1kcq | A | CDCADMIUM ION | H - 232 |
1kcq_A_207 | 1kcq | A | CDCADMIUM ION | V - 233 |
1p8x_A_473 | 1p8x | A | CACALCIUM ION | E - 475 |
Clusters included in this Subclass |
CLUSTER: HE.5.159 |