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Information on SUBCLASS 4.31.1
Subclass Accession number: 3128
Subclass: 4.31.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 24.7 +/- 22.9
Average RMSD (Å) : 0.513 +/- 0.155

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: hXpHhphD
(φψ)-conformation: bbabapaa
Pattern: x[afilv][ilv]x[NQSTY][h][aflmw][DEH]x[DE][chrs][AILTV]
Conservation:-1.053-0.330-0.020-0.591-0.2691.796-0.6391.148-1.0151.738-0.564-0.200
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a7t_A_741a7t   A7788TFIPNHWHGDCIEEE-SSSSHHHHbbbxabaxaaaa
1e5d_A_741e5d   A7485YLVIQHLELDHAEEEE---SHHHHbbbbabapaaaa
1jje_A_691jje   A7283GSISSHFHSDSTEEE-SSSSHHHHebbbabaxaaaa
1ko3_A_1091ko3   A111122RAVSTHFHDDRVEEE-SSSSHHHHbbbbabaxaaaa
1qh5_A_461qh5   A4960TVLTTHHHWDHAEEE---SSHHHHbbbbabapaaaa
1sml_A_771sml   A7990LILLSHAHADHAEEE-S--SHHHHbbbbabaxaaaa
1uch_*_291uch   -3142FVDVYGMDPELLEEEE--SSHHHHxbxxabapaaaa
2bc2_A_792bc2   A8192DVIITHAHADRIEEE--SSSHHHHbbbxababaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a7t_A_741a7t   A     ZNZINC ION H - 82
1a7t_A_741a7t   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID H - 84
1a7t_A_741a7t   A     ZNZINC ION H - 84
1a7t_A_741a7t   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID G - 85
1a7t_A_741a7t   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID D - 86
1a7t_A_741a7t   A     ZNZINC ION D - 86
1a7t_A_741a7t   A     ZNZINC ION C - 87
1e5d_A_741e5d   A     FEOMU-OXO-DIIRON H - 79
1e5d_A_741e5d   A     OXYOXYGEN MOLECULE H - 79
1e5d_A_741e5d   A     FMNFLAVIN MONONUCLEOTIDE E - 81
1e5d_A_741e5d   A     FEOMU-OXO-DIIRON E - 81
1e5d_A_741e5d   A     OXYOXYGEN MOLECULE E - 81
1e5d_A_741e5d   A     FEOMU-OXO-DIIRON L - 82
1e5d_A_741e5d   A     FEOMU-OXO-DIIRON D - 83
1e5d_A_741e5d   A     OXYOXYGEN MOLECULE D - 83
1e5d_A_741e5d   A     FEOMU-OXO-DIIRON H - 84
1jje_A_691jje   A     ZNZINC ION H - 77
1jje_A_691jje   A     BYS2-BENZO[1,3]DIOXOL-5-YLMETHYL-3-BENZYL-SUCCINIC ACID H - 77
1jje_A_691jje   A     ZNZINC ION H - 79
1jje_A_691jje   A     BYS2-BENZO[1,3]DIOXOL-5-YLMETHYL-3-BENZYL-SUCCINIC ACID H - 79
1jje_A_691jje   A     BYS2-BENZO[1,3]DIOXOL-5-YLMETHYL-3-BENZYL-SUCCINIC ACID S - 80
1jje_A_691jje   A     ZNZINC ION D - 81
1jje_A_691jje   A     BYS2-BENZO[1,3]DIOXOL-5-YLMETHYL-3-BENZYL-SUCCINIC ACID D - 81
1jje_A_691jje   A     ZNZINC ION S - 82
1ko3_A_1091ko3   A     ACTACETATE ION T - 110
1ko3_A_1091ko3   A     ZNZINC ION H - 116
1ko3_A_1091ko3   A     OHHYDROXIDE ION H - 116
1ko3_A_1091ko3   A     ZNZINC ION H - 118
1ko3_A_1091ko3   A     OHHYDROXIDE ION H - 118
1ko3_A_1091ko3   A     OHHYDROXIDE ION D - 119
1ko3_A_1091ko3   A     ZNZINC ION D - 120
1ko3_A_1091ko3   A     OHHYDROXIDE ION D - 120
1ko3_A_1091ko3   A     ZNZINC ION R - 121
1ko3_A_1091ko3   A     OHHYDROXIDE ION R - 121
1qh5_A_461qh5   A     ZNZINC ION H - 54
1qh5_A_461qh5   A     ZNZINC ION H - 56
1qh5_A_461qh5   A     GTTGLUTATHIONE H - 56
1qh5_A_461qh5   A     ZNZINC ION D - 58
1qh5_A_461qh5   A     GTTGLUTATHIONE D - 58
1qh5_A_461qh5   A     ZNZINC ION H - 59
1qh5_A_461qh5   A     GTTGLUTATHIONE H - 59
1sml_A_771sml   A     ZNZINC ION H - 86
1sml_A_771sml   A     ZNZINC ION D - 88
1sml_A_771sml   A     ZNZINC ION H - 89
2bc2_A_792bc2   A     CSD3-SULFINOALANINE T - 85
2bc2_A_792bc2   A     CSD3-SULFINOALANINE H - 86
2bc2_A_792bc2   A     CSD3-SULFINOALANINE H - 88
2bc2_A_792bc2   A     ZNZINC ION H - 88
2bc2_A_792bc2   A     CSD3-SULFINOALANINE D - 90
2bc2_A_792bc2   A     ZNZINC ION D - 90
2bc2_A_792bc2   A     CSD3-SULFINOALANINE R - 91
2bc2_A_792bc2   A     ZNZINC ION R - 91
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e5d_A_741e5d   A FEADIIRON REDOX CATALYTIC SITE FOR DIRECT DIOXYGEN TO WATER REDUCTIONH - 79
1e5d_A_741e5d   A FMBFMN BINDING SITE FOR CHAIN BE - 81
1e5d_A_741e5d   A FEADIIRON REDOX CATALYTIC SITE FOR DIRECT DIOXYGEN TO WATER REDUCTIOND - 83
1qh5_A_461qh5   A ZNABINUCLEAR ZINC BINDING SITE IN A MOLECULEH - 54
1qh5_A_461qh5   A ZNABINUCLEAR ZINC BINDING SITE IN A MOLECULEH - 59
2bc2_A_792bc2   A ZNAZN BINDING SITE, MOLECULE A.H - 86
2bc2_A_792bc2   A ZNAZN BINDING SITE, MOLECULE A.H - 88
2bc2_A_792bc2   A ZNAZN BINDING SITE, MOLECULE A.D - 90

Clusters included in this Subclass
CLUSTER: EH.4.164
CLUSTER: EH.4.371
CLUSTER: EH.5.96