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Information on SUBCLASS 4.52.1
Subclass Accession number: 3161
Subclass: 4.52.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 72.8 +/- 12.6
Average RMSD (Å) : 0.180 +/- 0.045

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: DIXGApSp
(φψ)-conformation: bbpglpaa
Pattern: [DE][IV][A][I][T][E][L][D][IV][AQ][G][A][PST][AS][ST][DT][Y][AV][ADN][V][TV][N][AD][C][L]
Conservation:-0.067-0.1820.0700.0700.5960.5960.0701.123-0.182-1.1201.1230.070-1.224-0.689-0.584-0.8471.650-0.984-1.3410.070-0.8571.123-1.2572.7040.070
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg4_*_2331bg4   -233257EIAITELDIAGASSTDYVNVVNACLEEEEEEEEETT--HHHHHHHHHHHHbbbxaaxbbpglxaaaaaaaaaaaa
1i1w_A_2321i1w   A232256EVAITELDVAGASSTDYVNVVNACLEEEEEEEEETT--HHHHHHHHHHHHbbbxaaxbbpvlxaaaaaaaaaaaa
1od8_A_2311od8   A231255DVAITELDIQGAPASTYANVTNDCLEEEEEEEEETT--HHHHHHHHHHHHxbbxaapbbpvlxaaaaaaaaaaaa
1tux_*_2321tux   -232256EVAITELDIAGATSTDYVDVVNACLEEEEEEEEETT--HHHHHHHHHHHHbbbxaaxbbpglxaaaaaaaaaaaa
1v6w_A_2311v6w   A231255DVAITELDIQGASSSTYAAVTNDCLEEEEEEEEETT--HHHHHHHHHHHHxbbxaapbbpvlpaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bg4_*_2331bg4   *     GOLGLYCEROL E - 238
1bg4_*_2331bg4   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL T - 247
1bg4_*_2331bg4   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL D - 248
1bg4_*_2331bg4   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL N - 251
1bg4_*_2331bg4   *     GOLGLYCEROL L - 257
1i1w_A_2321i1w   A     GOLGLYCEROL E - 237
1i1w_A_2321i1w   A     GOLGLYCEROL N - 253
1i1w_A_2321i1w   A     GOLGLYCEROL A - 254
1i1w_A_2321i1w   A     GOLGLYCEROL L - 256
1i1w_A_2321i1w   A     GOLGLYCEROL N - 257
1od8_A_2311od8   A     IMDIMIDAZOLE D - 231
1od8_A_2311od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM E - 236
1od8_A_2311od8   A     XYPBETA-D-XYLOPYRANOSE E - 236
1od8_A_2311od8   A     IMDIMIDAZOLE E - 236
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bg4_*_2331bg4   * ACTACTIVE SITE.E - 238
1od8_A_2311od8   A AC9XDL BINDING SITE FOR CHAIN AE - 236

Clusters included in this Subclass
CLUSTER: EH.3.174