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Information on SUBCLASS 4.60.1
Subclass Accession number: 3169
Subclass: 4.60.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 17.5 +/- 18.4
Average RMSD (Å) : 0.300 +/- 0.082

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 0-45 rho (°): 45-90
Consensus Sequence: hXccXYch
(φψ)-conformation: bbalbpaa
Pattern: [ILV]x[LV][IV][FMVW][NTV][DN][CDGN][GQT][NY][GN][AFLM][ILV][AEKR]x[EFQY][AEQ][EGN]x
Conservation:0.840-0.8470.7801.368-0.404-0.4371.700-0.946-0.7211.2661.373-0.6500.831-0.454-1.536-0.6500.045-0.219-1.339
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bfd_*_4491bfd   -449467IFVIMNNGTYGALRWFAGVEEEEEE-SB-HHHHHHHHHbbbxxxavbxaaaaaaaaa
1ozh_A_4671ozh   A468486LHLIWVDNGYNMVAIQEEKEEEEEE-SB-HHHHHHHHHbbbbxxavbxaaaaaaaaa
1pox_A_4681pox   A468486INVVFTNCQYGFIKDEQEDEEEEEE-SB-HHHHHHHHHxxbbbxalbxaaaaaaaaa
1upa_A_4841upa   A484502VTVVVNNDTNGLIELYQNIEEEEEE-SB-HHHHHHHHHbbbxxbalbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bfd_*_4491bfd   *     CACALCIUM ION M - 453
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE M - 453
1bfd_*_4491bfd   *     CACALCIUM ION N - 454
1bfd_*_4491bfd   *     CACALCIUM ION N - 455
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE N - 455
1bfd_*_4491bfd   *     CACALCIUM ION G - 456
1bfd_*_4491bfd   *     CACALCIUM ION T - 457
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE T - 457
1bfd_*_4491bfd   *     CACALCIUM ION Y - 458
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE Y - 458
1bfd_*_4491bfd   *     CACALCIUM ION G - 459
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE G - 459
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE A - 460
1bfd_*_4491bfd   *     TPPTHIAMINE DIPHOSPHATE L - 461
1ozh_A_4671ozh   A     MGMAGNESIUM ION W - 472
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE W - 472
1ozh_A_4671ozh   A     MGMAGNESIUM ION V - 473
1ozh_A_4671ozh   A     MGMAGNESIUM ION D - 474
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE D - 474
1ozh_A_4671ozh   A     MGMAGNESIUM ION N - 475
1ozh_A_4671ozh   A     MGMAGNESIUM ION G - 476
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE G - 476
1ozh_A_4671ozh   A     MGMAGNESIUM ION Y - 477
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE Y - 477
1ozh_A_4671ozh   A     MGMAGNESIUM ION N - 478
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE N - 478
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE M - 479
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE V - 480
1ozh_A_4671ozh   A     HE32-HYDROXYETHYL DIHYDROTHIACHROME DIPHOSPHATE Q - 483
1pox_A_4681pox   A     MGMAGNESIUM ION F - 472
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE F - 472
1pox_A_4681pox   A     MGMAGNESIUM ION T - 473
1pox_A_4681pox   A     MGMAGNESIUM ION N - 474
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE N - 474
1pox_A_4681pox   A     MGMAGNESIUM ION C - 475
1pox_A_4681pox   A     MGMAGNESIUM ION Q - 476
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE Q - 476
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE Y - 477
1pox_A_4681pox   A     MGMAGNESIUM ION G - 478
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE G - 478
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE F - 479
1pox_A_4681pox   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 479
1pox_A_4681pox   A     GOLGLYCEROL F - 479
1pox_A_4681pox   A     TPPTHIAMINE DIPHOSPHATE I - 480
1pox_A_4681pox   A     GOLGLYCEROL I - 480
1pox_A_4681pox   A     GOLGLYCEROL E - 483
1upa_A_4841upa   A     MSESELENOMETHIONINE V - 484
1upa_A_4841upa   A     MSESELENOMETHIONINE V - 486
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE V - 488
1upa_A_4841upa   A     MGMAGNESIUM ION V - 488
1upa_A_4841upa   A     MGMAGNESIUM ION N - 489
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE N - 490
1upa_A_4841upa   A     MGMAGNESIUM ION N - 490
1upa_A_4841upa   A     MGMAGNESIUM ION D - 491
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE T - 492
1upa_A_4841upa   A     MGMAGNESIUM ION T - 492
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE N - 493
1upa_A_4841upa   A     MGMAGNESIUM ION N - 493
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE G - 494
1upa_A_4841upa   A     MGMAGNESIUM ION G - 494
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE L - 495
1upa_A_4841upa   A     TPPTHIAMINE DIPHOSPHATE I - 496
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1upa_A_4841upa   A AC2MG BINDING SITE FOR CHAIN AN - 490
1upa_A_4841upa   A AC1TPP BINDING SITE FOR CHAIN AT - 492
1upa_A_4841upa   A AC1TPP BINDING SITE FOR CHAIN AN - 493
1upa_A_4841upa   A AC3SO4 BINDING SITE FOR CHAIN AL - 495

Clusters included in this Subclass
CLUSTER: EH.3.179