ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.79.1

Subclass Accession number: 3188
Subclass: 4.79.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0016829 (>50 %) GO:0016846 (>50 %)
SCOP : 53382 (>75 %) 53383 (>75 %) 53402 (>50 %)

Number of loops: 3

Average sequence ID (%) : 24.0 +/- 16.7
Average RMSD (Å) : 0.467 +/- 0.153

Consensus geometry

d (Å): 11

delta (°): 0-45

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	hphhXhpp
(φψ)-conformation:	bbapbpaa

Pattern:	x	[R]	[IL]	[NS]	[ALY]	[AG]	[ACT]	[AP]	[RSY]	[ES]	[KV]	[IL]	[EQ]	[EK]	[AGS]	[LMV]	[ADE]	[GR]	[LM]	x	[KNR]	[AV]	[IL]	[KR]	[ADE]
Conservation:	-0.894	2.446	0.667	1.011	-1.456	0.056	-0.532	0.543	-1.559	-0.058	-0.621	0.679	1.181	0.736	-0.532	-0.018	-0.840	-0.425	0.791	-1.867	-0.121	-0.177	0.667	1.164	-0.840

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c7n_A_367	1c7n	A	368	392	ERINLAAPSSVIQESLERLNKALKD	EEEE--S-HHHHHHHHHHHHHHHHH	bbbxaxbxaaaaaaaaaaaaaaaaa
1d2f_A_363	1d2f	A	364	388	VRLNAGCPRSKLEKGVAGLINAIRA	EEEE--S-HHHHHHHHHHHHHHHHH	bbbxaxbxaaaaaaaaaaaaaaaaa
1gde_A_361	1gde	A	361	385	VRISYATAYEKLEEAMDRMERVLKE	EEEE--S-HHHHHHHHHHHHHHHHH	bxbbaxbpaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass