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Information on SUBCLASS 5.3.1
Subclass Accession number: 3207
Subclass: 5.3.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 17.1 +/- 22.8
Average RMSD (Å) : 0.879 +/- 0.266

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XhXXXXXXp
(φψ)-conformation: bbpaabpaa
Pattern: x[acfgilptv]xx[agilpvy][dpstv]x[adegnqrst][gilmtv][adnpstv]x[adekqs][adegknqrst][afgitv][adeknqrt]
Conservation:-1.000-0.985-0.437-1.423-0.0620.360-0.4400.3270.1001.010-1.3312.4830.5240.190-0.318
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cxv_A_961cxv   A100114RIVNYTPDMSHSEVEEE----TTS-HHHHHbxabbxaabxaaaaa
1e3j_A_1361e3j   A136149.CHKLPDNVSLEEGA.EEE--TTS-HHHHH.bxpbxaabxaaaaa
1fbl_*_1131fbl   -117131RIENYTPDLSREDVDEE----TTS-HHHHHbxabbxaabpaaaaa
1gkd_A_1201gkd   A124138WIQNYSEDLPRAVIDEE----SSS-HHHHHbxabbxaabxaaaaa
1gve_A_1031gve   A107121YLHFPDHGTPIEETLEE-S--TTS-HHHHHbxabxbaabpaaaaa
1hfc_*_1131hfc   -117131RIENYTPDLPRADVDEE----TTS-HHHHHbxabbxaabxaaaaa
1hy7_A_961hy7   A100114RIVNYTPDLPKDAVDEE----TTS-HHHHHbxabbxaabwaaaaa
1i1q_A_4771i1q   A482496AGAGIVLDSVPQSEAEE--B-TT--HHHHHbbbxbbaaxbaaaaa
1i76_A_921i76   A96110RIRNYTPQLSEAEVEEE----TTS-HHHHHbxabbbaabxaaaaa
1i7q_A_4771i7q   A482496AGAGVVQDSIPEREAEE--B-TT--HHHHHbbbxbbaaxbaaaaa
1j93_A_2691j93   A269282.VVSLDWTVDMADGR.EEE--TTS-HHHHH.bbxxxaabxaaaaa
1jk3_A_1131jk3   A117131RINNYTPDMNREDVDEE-S--TTS-HHHHHbxabbxaabxaaaaa
1jkx_A_1481jkx   A152166AKVPVFAGDSEDDITEEEE--TT--HHHHHbbbxbbaapxaaaaa
1jqb_A_11341jqb   A11341146..AILPKDMPLENAV..EE--TTS-HHHHH..bxxpaaxpaaaaa
1l6j_A_1201l6j   A124138WIQNYSEDLPRAVIDEE----TTS-HHHHHbxabbxaabxaaaaa
1mdb_A_1011mdb   A101115LPVFALPSHRSSEITEEEE--TT--HHHHHbxbxxbaaxbaaaaa
1mmq_*_1131mmq   -117131RIVSYTRDLPHITVDEE----TTS-HHHHHbxabbxaabwaaaaa
1ogw_A_121ogw   A1327ITLEVEPSDTIENVKEEEE--TTSBHHHHHbbbbbbaaxxaaaaa
1pyf_A_1211pyf   A123137YIHFPDEHTPKDEAVEE-S--SSS-HHHHHbxabxxaaxpaaaaa
1pz1_A_1211pz1   A123137QVHWPDPLVPIEETAEE-S--TTS-HHHHHbxabxbaabpaaaaa
1q3a_A_1121q3a   A116130RIVNYTPDLPRDAVDEE----TTS-HHHHHbxabbxaabxaaaaa
1qmh_A_2471qmh   A250264FFVVGEKRVSAEVVAEEEE--TT--HHHHHbbbxxxaabxaaaaa
1qor_A_1061qor   A106119.AAILPAAISFEQAA.EEE--TTS-HHHHH.bbxxxaabxaaaaa
1r1m_A_1101r1m   A115129VEGHTDFMGSDKYNQEEEE--SSS-HHHHHxbxbbxaabxaaaaa
1r29_A_711r29   A7184.VINLDPEINPEGFN.EEE--TTS-HHHHH.bbxxpaaxxaaaaa
1r3s_A_2791r3s   A279292.VVGLDWTVAPKKAR.EEE--TTS-HHHHH.bbxbxaaxxaaaaa
1s1p_A_191s1p   A2135FGTYAPPEVPRSKALEE----TTS-TTHHHxxaxbwaaxwaaaaa
830c_A_117830c   A121135RIVNYTPDMTHSEVEEE-S--TTS-HHHHHbxabbxaabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e3j_A_1361e3j   A     BO3BORIC ACID V - 143
1e3j_A_1361e3j   A     BO3BORIC ACID S - 144
1e3j_A_1361e3j   A     BO3BORIC ACID L - 145
1e3j_A_1361e3j   A     BO3BORIC ACID E - 146
1fbl_*_1131fbl   *     CACALCIUM ION T - 122
1fbl_*_1131fbl   *     CACALCIUM ION P - 123
1fbl_*_1131fbl   *     CACALCIUM ION D - 124
1gkd_A_1201gkd   A     CACALCIUM ION S - 129
1gkd_A_1201gkd   A     CACALCIUM ION E - 130
1gkd_A_1201gkd   A     CACALCIUM ION D - 131
1gkd_A_1201gkd   A     CACALCIUM ION V - 136
1gkd_A_1201gkd   A     CACALCIUM ION D - 139
1gkd_A_1201gkd   A     CACALCIUM ION R - 143
1gve_A_1031gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE H - 109
1gve_A_1031gve   A     CITCITRIC ACID H - 109
1gve_A_1031gve   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 110
1gve_A_1031gve   A     CITCITRIC ACID F - 110
1gve_A_1031gve   A     GOLGLYCEROL D - 112
1gve_A_1031gve   A     GOLGLYCEROL H - 113
1gve_A_1031gve   A     GOLGLYCEROL G - 114
1gve_A_1031gve   A     GOLGLYCEROL T - 115
1gve_A_1031gve   A     GOLGLYCEROL I - 117
1hy7_A_961hy7   A     CACALCIUM ION R - 100
1hy7_A_961hy7   A     CACALCIUM ION T - 105
1hy7_A_961hy7   A     CACALCIUM ION P - 106
1hy7_A_961hy7   A     CACALCIUM ION D - 107
1i7q_A_4771i7q   A     PYRPYRUVIC ACID Q - 481
1i7q_A_4771i7q   A     PYRPYRUVIC ACID A - 482
1i7q_A_4771i7q   A     BEZBENZOIC ACID G - 483
1i7q_A_4771i7q   A     PYRPYRUVIC ACID G - 483
1i7q_A_4771i7q   A     MGMAGNESIUM ION A - 484
1i7q_A_4771i7q   A     BEZBENZOIC ACID A - 484
1i7q_A_4771i7q   A     PYRPYRUVIC ACID A - 484
1i7q_A_4771i7q   A     MGMAGNESIUM ION G - 485
1i7q_A_4771i7q   A     BEZBENZOIC ACID G - 485
1i7q_A_4771i7q   A     PYRPYRUVIC ACID G - 485
1i7q_A_4771i7q   A     MGMAGNESIUM ION E - 495
1i7q_A_4771i7q   A     BEZBENZOIC ACID E - 495
1i7q_A_4771i7q   A     MGMAGNESIUM ION E - 498
1i7q_A_4771i7q   A     BEZBENZOIC ACID E - 498
1i7q_A_4771i7q   A     MGMAGNESIUM ION K - 502
1i7q_A_4771i7q   A     BEZBENZOIC ACID K - 502
1i7q_A_4771i7q   A     PYRPYRUVIC ACID K - 502
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE T - 166
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE V - 169
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE Q - 170
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE E - 173
1jkx_A_1481jkx   A     138N-[5'-O-PHOSPHONO-RIBOFURANOSYL]-2-[2-HYDROXY-2-[4-[GLUTAMIC ACID]-N-CARBONYLPHENYL]-3-[2-AMINO-4-HYDROXY -QUINAZOLIN-6-YL]-PROPANYLAMINO]-ACETAMIDE H - 174
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE L - 15
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE I - 23
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE V - 26
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE K - 27
1ogw_A_121ogw   A     LEF(4S)-5-FLUORO-L-LEUCINE I - 30
1pyf_A_1211pyf   A     MSESELENOMETHIONINE L - 121
1pyf_A_1211pyf   A     MSESELENOMETHIONINE Y - 123
1pyf_A_1211pyf   A     MSESELENOMETHIONINE N - 138
1pyf_A_1211pyf   A     MSESELENOMETHIONINE A - 139
1pyf_A_1211pyf   A     MSESELENOMETHIONINE L - 140
1pyf_A_1211pyf   A     MSESELENOMETHIONINE N - 141
1pz1_A_1211pz1   A     MSESELENOMETHIONINE Y - 122
1pz1_A_1211pz1   A     MSESELENOMETHIONINE Q - 123
1pz1_A_1211pz1   A     MSESELENOMETHIONINE V - 124
1pz1_A_1211pz1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE H - 125
1pz1_A_1211pz1   A     MSESELENOMETHIONINE W - 126
1pz1_A_1211pz1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 126
1pz1_A_1211pz1   A     MSESELENOMETHIONINE E - 135
1pz1_A_1211pz1   A     MSESELENOMETHIONINE T - 136
1pz1_A_1211pz1   A     MSESELENOMETHIONINE A - 137
1pz1_A_1211pz1   A     MSESELENOMETHIONINE E - 138
1q3a_A_1121q3a   A     CACALCIUM ION T - 121
1q3a_A_1121q3a   A     CACALCIUM ION P - 122
1q3a_A_1121q3a   A     CACALCIUM ION D - 123
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 123
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 124
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 127
1qor_A_1061qor   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 130
1r1m_A_1101r1m   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL Y - 137
1r1m_A_1101r1m   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL A - 140
1r1m_A_1101r1m   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL N - 141
1r1m_A_1101r1m   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL V - 144
1s1p_A_191s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 21
1s1p_A_191s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 22
1s1p_A_191s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 23
1s1p_A_191s1p   A     ACTACETATE ION Y - 24
1s1p_A_191s1p   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Y - 24
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gve_A_1031gve   A BC5CIT BINDING SITE FOR CHAIN AH - 109
1gve_A_1031gve   A AC7GOL BINDING SITE FOR CHAIN AH - 113

Clusters included in this Subclass
CLUSTER: EH.7.1
CLUSTER: EH.9.1