Information on SUBCLASS 5.4.2 |
Subclass Accession number: 3212
Subclass: 5.4.2 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 19.8 Average RMSD (Å) : 0.875 +/- 0.287 Consensus geometry
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Consensus Sequence: | XXppPhpXX |
(φψ)-conformation: | bbabpppaa |
Pattern: | x | [GLY] | x | [IV] | [EGT] | [LTW] | [AERT] | [DHKS] | [P] | [FV] | [ADEN] | x | [ADNT] | x | x | [AEKQ] | [AEKQ] | [CFL] |
Conservation: | -0.430 | -0.544 | -0.503 | 1.368 | -0.389 | -0.266 | -0.446 | -0.290 | 3.504 | 0.439 | -0.212 | -0.720 | -0.368 | -0.681 | -0.485 | -0.055 | -0.055 | 0.134 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ii7_A_301 | 1ii7 | A | 303 | 320 | RLNIGWRKPFDLTEIKEL | EEEEEESS----HHHHHH | bbbbxbabwbxaaaaaaa |
1ksk_A_130 | 1ksk | A | 131 | 148 | TYLVTLESPVADDTAEQF | EEEEEESS---TTHHHHH | bbbbbbabppxaaaaaaa |
1s0a_A_365 | 1s0a | A | 365 | 382 | IGVVETTHPVNMAALQKF | EEEEEESS-B-HHHHHHH | bbbbxbabxxxaaaaaaa |
1vio_A_130 | 1vio | A | 131 | 148 | TYLVTLADPVEENYSAAC | EEEEEESS---TTHHHHH | bbxbbbabpxbaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ksk_A_130 | 1ksk | A | URAURACIL | K - 130 |
1ksk_A_130 | 1ksk | A | URAURACIL | Y - 132 |
1ksk_A_130 | 1ksk | A | MSESELENOMETHIONINE | F - 148 |
1vio_A_130 | 1vio | A | BU11,4-BUTANEDIOL | Y - 132 |
1vio_A_130 | 1vio | A | BU11,4-BUTANEDIOL | L - 133 |
Clusters included in this Subclass |
CLUSTER: EH.6.249 |
CLUSTER: EH.7.193 |