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Information on SUBCLASS 5.4.2
Subclass Accession number: 3212
Subclass: 5.4.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 16.7 +/- 19.8
Average RMSD (Å) : 0.875 +/- 0.287

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXppPhpXX
(φψ)-conformation: bbabpppaa
Pattern: x[GLY]x[IV][EGT][LTW][AERT][DHKS][P][FV][ADEN]x[ADNT]xx[AEKQ][AEKQ][CFL]
Conservation:-0.430-0.544-0.5031.368-0.389-0.266-0.446-0.2903.5040.439-0.212-0.720-0.368-0.681-0.485-0.055-0.0550.134
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ii7_A_3011ii7   A303320RLNIGWRKPFDLTEIKELEEEEEESS----HHHHHHbbbbxbabwbxaaaaaaa
1ksk_A_1301ksk   A131148TYLVTLESPVADDTAEQFEEEEEESS---TTHHHHHbbbbbbabppxaaaaaaa
1s0a_A_3651s0a   A365382IGVVETTHPVNMAALQKFEEEEEESS-B-HHHHHHHbbbbxbabxxxaaaaaaa
1vio_A_1301vio   A131148TYLVTLADPVEENYSAACEEEEEESS---TTHHHHHbbxbbbabpxbaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ksk_A_1301ksk   A     URAURACIL K - 130
1ksk_A_1301ksk   A     URAURACIL Y - 132
1ksk_A_1301ksk   A     MSESELENOMETHIONINE F - 148
1vio_A_1301vio   A     BU11,4-BUTANEDIOL Y - 132
1vio_A_1301vio   A     BU11,4-BUTANEDIOL L - 133

Clusters included in this Subclass
CLUSTER: EH.6.249
CLUSTER: EH.7.193