Information on SUBCLASS 5.6.3 |
Subclass Accession number: 3220
Subclass: 5.6.3 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 14.0 +/- 17.1 Average RMSD (Å) : 1.060 +/- 0.219 Consensus geometry
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Consensus Sequence: | hphcphXXc |
(φψ)-conformation: | bbaaapbaa |
Pattern: | [FQY] | x | [ALV] | [GKNQ] | [KNST] | x | [DGPT] | [enps] | [DNS] | x | x | [knqy] | [IKT] | x | x |
Conservation: | 1.623 | -0.147 | 0.740 | 0.051 | 0.436 | -1.055 | -0.383 | -1.239 | 2.358 | -0.313 | 0.290 | -0.817 | -0.333 | -1.133 | -0.078 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apa_*_9 | 1apa | - | 11 | 25 | FDVGNATINKYATFM | EEGGG--HHHHHHHH | bxaaaxbaaaaaaaa |
1egz_A_187 | 1egz | A | 193 | 207 | FYAGTHGESLRNKAR | EETTT--HHHHHHHH | bbaaabbaaaaaaaa |
1jya_A_93 | 1jya | A | 93 | 107 | QPLNSLDNNSLYTQL | EEGGG--TTHHHHHH | bxaaaxbaaaaaaaa |
1kfu_L_211 | 1kfu | L | 215 | 229 | YELKKPPPNLFKIIQ | EETTS--TTHHHHHH | bxaaawxaaaaaaaa |
1kxr_A_222 | 1kxr | A | 225 | 239 | YDLQKAPSDLYQIIL | EEGGG--TTHHHHHH | bxaaapxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | Q - 93 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | S - 102 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | L - 103 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | Y - 104 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | T - 105 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | Q - 106 |
1jya_A_93 | 1jya | A | MSESELENOMETHIONINE | L - 107 |
Clusters included in this Subclass |
CLUSTER: EH.6.199 |
CLUSTER: EH.7.169 |