Information on SUBCLASS 5.6.5 |
Subclass Accession number: 3222
Subclass: 5.6.5 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.1 (>75 %) 2.7.1.50 GO : GO:0000287 (>75 %) GO:0004417 (>75 %) GO:0005524 (>75 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016773 (>75 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0016836 (>75 %) SCOP : 52953 (>75 %) 52968 (>75 %) 52969 (>75 %) 53612 (>75 %) 53613 (>75 %) 53620 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 31.3 +/- 34.3 Average RMSD (Å) : 1.525 +/- 0.050 Consensus geometry
|
Consensus Sequence: | hphhXLpXX |
(φψ)-conformation: | _baaapbaa |
Pattern: | [AE] | [LV] | [FV] | x | [NQ] | [AI] | [GP] | [LT] | [L] | [DST] | x | [EG] | [STW] | x | [ER] | [AQS] | [IM] | [GIV] | [IK] | [AN] | [AGT] | [AEK] | x | [AY] | [AN] |
Conservation: | 0.093 | 1.049 | 0.261 | -1.724 | 1.381 | -0.075 | 0.695 | 0.313 | 2.480 | -0.011 | -1.213 | 0.329 | -0.366 | -1.290 | 1.162 | -0.251 | 1.335 | -1.106 | -0.390 | -0.250 | -0.482 | -0.386 | -1.665 | -0.082 | 0.191 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eex_B_152 | 1eex | B | 152 | 176 | ELFPQAPLLTLETYRQIGKNAARYA | EEE--GGG--HHHHHHHHHHHHHHH | bbbabaaaxbaaaaaaaaaaaaaaa |
1ekk_A_61 | 1ekk | A | 61 | 85 | ALVLNIGTLSKESVEAMIIAGKSAN | EEEEE-TT--HHHHHHHHHHHHHHH | bbbbbaaaxbaaaaaaaaaaaaaaa |
1iwp_B_119 | 1iwp | B | 119 | 143 | ELFSQAPLLTLETYRQIGKNAARYA | EEE--GGG--HHHHHHHHHHHHHHH | bbbabaaaxbaaaaaaaaaaaaaaa |
1v8a_A_59 | 1v8a | A | 59 | 83 | AVVINIGTLDSGWRRSMVKATEIAN | EEEEE-TT--HHHHHHHHHHHHHHH | bbbbbaaaxbaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | E - 152 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | L - 153 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | F - 154 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | P - 155 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | Q - 156 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | A - 157 |
1eex_B_152 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | P - 158 |
1ekk_A_61 | 1ekk | A | CSWCYSTEINE-S-DIOXIDE | V - 63 |
1ekk_A_61 | 1ekk | A | CSWCYSTEINE-S-DIOXIDE | N - 65 |
1ekk_A_61 | 1ekk | A | TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL | N - 65 |
1ekk_A_61 | 1ekk | A | TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL | G - 67 |
1ekk_A_61 | 1ekk | A | TZE2-(4-METHYL-THIAZOL-5-YL)-ETHANOL | T - 68 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | L - 120 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | F - 121 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | S - 122 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | Q - 123 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | A - 124 |
1iwp_B_119 | 1iwp | B | B12COBALAMIN | P - 125 |
Clusters included in this Subclass |
CLUSTER: EH.6.187 |