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Information on SUBCLASS 4.38.1
Subclass Accession number: 332
Subclass: 4.38.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005102 (>75 %)  GO:0005160 (>75 %)  GO:0008083 (>75 %)  
SCOP : 57500 (>75 %)  57501 (>75 %)  57507 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 5.3 +/- 7.7
Average RMSD (Å) : 1.000 +/- 0.200

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXpXXpX
(φψ)-conformation: aapapabp
Pattern: [EQR][ASV][AV]x[FQR][LV]x[AEL][AQT][STV][KNS][CES][ADK][HKN]x[VY]x[FLV]x
Conservation:1.177-0.1781.034-1.286-0.6701.5450.069-1.039-0.178-0.0540.684-0.424-0.5470.931-1.0391.984-1.5320.315-0.793
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kwi_A_321kwi   A4058RAVDRLNEQSSEANLYRLLHHHHHHHHH--SSEEEEEEaaaaaaaaapaxabxbbpa
1nw3_A_1681nw3   A168186QVVLQVAAATNCKHHYGVEHHHHHHHHH---SEEEEEEaaaaaaaaabaxabbbbbb
1o7j_A_981o7j   A100118ESAYFLHLTVKSDKPVVFVHHHHHHHHH----S-EEEEaaaaaaaaaxabaxwbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE Q - 168
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE V - 169
1nw3_A_1681nw3   A     ACTACETATE ION Y - 183
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE V - 185
1nw3_A_1681nw3   A     SAMS-ADENOSYLMETHIONINE E - 186

Clusters included in this Subclass
CLUSTER: HE.5.192