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Information on SUBCLASS 6.3.4
Subclass Accession number: 3328
Subclass: 6.3.4 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004518 (>50 %)  GO:0016788 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 15.8 +/- 14.4
Average RMSD (Å) : 0.933 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hcXRXXpXph
(φψ)-conformation: bpaaaaapaa
Pattern: [FK][GIV][AV][IV][DG][AES][R][EGT]x[ERT][GS][EQR][ALV]xx[AER][AL][AKM]x
Conservation:-0.156-0.8390.4431.6180.978-0.1762.852-0.839-0.744-0.3650.6620.581-0.271-1.028-0.839-0.4600.071-0.649-0.839
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byr_A_551byr   A5775KIVIDERGNTGRASIAAMNEEEEESTT--SHHHHHHHHbbbbxaaaaaxaaaaaaaa
1j23_A_61j23   A624KVVVDSRELRSEVVKRLKLEEEEEGGGTTSHHHHHHHHbbxbxaaaaaxaaaaaaaa
1of8_A_1741of8   A174192FGAIGARTTESQLHRELASEEEE-TTTTT-HHHHHHHHbbbbxaaaaaxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1of8_A_1741of8   A     PEPPHOSPHOENOLPYRUVATE A - 176
1of8_A_1741of8   A     PEPPHOSPHOENOLPYRUVATE I - 177
1of8_A_1741of8   A     PEPPHOSPHOENOLPYRUVATE G - 178
1of8_A_1741of8   A     PEPPHOSPHOENOLPYRUVATE A - 179
1of8_A_1741of8   A     PEPPHOSPHOENOLPYRUVATE R - 180
1of8_A_1741of8   A     G3P3-PHOSPHOGLYCEROL R - 180
1of8_A_1741of8   A     GOLGLYCEROL Q - 185
1of8_A_1741of8   A     GOLGLYCEROL L - 186
1of8_A_1741of8   A     GOLGLYCEROL E - 189
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1of8_A_1741of8   A AC2PEP BINDING SITE FOR CHAIN AG - 178
1of8_A_1741of8   A AC4GOL BINDING SITE FOR CHAIN AQ - 185
1of8_A_1741of8   A AC4GOL BINDING SITE FOR CHAIN AE - 189

Clusters included in this Subclass
CLUSTER: EH.6.352