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Information on SUBCLASS 6.4.2
Subclass Accession number: 3331
Subclass: 6.4.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 10.3 +/- 11.1
Average RMSD (Å) : 0.883 +/- 0.172

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhhXXXXXXp
(φψ)-conformation: bpppaappaa
Pattern: x[IPTV][alvy][dnpr][adk]x[fkmtv][NPS]x[AENR][dens]x[iklv]
Conservation:-0.5141.332-0.686-0.848-0.287-1.339-0.5032.118-0.1741.2200.398-0.693-0.024
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b16_A_561b16   A6072HTYDVTVPVAESKEE--TTS-HHHHHbxbbaaxxaaaaa
1jqb_A_11341jqb   A11341146AILPKDMPLENAVEE--TTS-HHHHHbxxpaaxpaaaaa
1lci_*_1011lci   -103115APANDIYNERELLEE--TT--HHHHHbwbpaapxaaaaa
1mbx_C_271mbx   C3244LVNDDYTPMEFVIEE--SSS-HHHHHbbxbaaxxaaaaa
1ry2_A_2151ry2   A217229SVVFAGFSSNSLREE--TTS-HHHHHbxbpaappaaaaa
1udv_A_71udv   A820IVVRKTKNVEDHVEE--SSS-HHHHHbxxxaabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT Y - 62
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT D - 63
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT V - 64
1b16_A_561b16   A     NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT T - 65
1mbx_C_271mbx   C     GOLGLYCEROL Y - 28
1udv_A_71udv   A     ZNZINC ION K - 14
1udv_A_71udv   A     ZNZINC ION D - 18
1udv_A_71udv   A     ZNZINC ION H - 19
1udv_A_71udv   A     ZNZINC ION D - 22

Clusters included in this Subclass
CLUSTER: EH.6.117
CLUSTER: EH.7.68