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Information on SUBCLASS 6.12.1
Subclass Accession number: 3346
Subclass: 6.12.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 21.2 +/- 21.1
Average RMSD (Å) : 0.718 +/- 0.409

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXpXXphpXp
(φψ)-conformation: bbababbpaa
Pattern: xx[FGIL][FHLY][AGSTV][DKR][EGKST][dkpt][degnst][FILV][ehst][dps][ADEKQ]x[klv][DEKQR][AEKNR][ACFIMY]x[AEKQR][afilv][acfgmtv]
Conservation:-0.802-1.861-0.0631.109-0.1141.798-0.496-0.080-0.5211.4640.067-0.0341.115-1.0940.1861.5790.7320.055-1.3730.126-0.292-1.500
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bj7_*_1101bj7   -114135TEGLAKGTSFTPEELEKYQQLNEEEEESSS---HHHHHHHHHHHbbbbbaxabbxaaaaaaaaaaa
1dzk_A_1111dzk   A115136TGLLGKGTDIEDQDLEKFKEVTEEEEESSS---HHHHHHHHHHHbbbbbabaxpxaaaaaaaaaaa
1ega_A_561ega   A5778QAIYVDTPGLHMEEKRAINRLMEEEEESSSS--HHHHHHHHHHHbxbxbababxxaaaaaaaaaaa
1ew3_A_1331ew3   A136157FEFYAREPDVSPEIKEEFVKIVEEEEESSSS--HHHHHHHHHHHbbbbbababbxaaaaaaaaaaa
1gm6_A_1151gm6   A120141MEFYGRKPDVEPKLKDKFVEICEEEEESSS---HHHHHHHHHHHbbbbbababbxaaaaaaaaaaa
1i4u_A_1281i4u   A133154SFIFSRSANLADQYVKKCEAAFEEEEESSSS--HHHHHHHHHHHbbbbbababbpaaaaaaaaaaa
1ifv_A_1101ifv   A117138VKFHTKGDVLSDAVREEAKARGEEEEESSS---HHHHHHHHHHHbbbxxababbxaaaaaaaaaaa
1l6m_A_1301l6m   A135156ITLYGRTKELTSELKENFIRFSEEEEESSS---HHHHHHHHHHHbbbxbababbpaaaaaaaaaaa
1qwd_A_1381qwd   A138159LWILSRTPTISDEVKQEMLAVAEEEEESSSS--HHHHHHHHHHHbbbbbababbxaaaaaaaaaaa
1qy1_A_1121qy1   A117138MGLYGREPDLSSDIKERFAQLCEEEEESSS---HHHHHHHHHHHbbbbbababbxaaaaaaaaaaa
2a2u_A_1122a2u   A117138MVLYGRTKDLSSDIKEKFAKLCEEEEESSSS--HHHHHHHHHHHbbbbbababbpaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dzk_A_1111dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE M - 114
1dzk_A_1111dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE T - 115
1dzk_A_1111dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE G - 116
1dzk_A_1111dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 117
1dzk_A_1111dzk   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 118
1gm6_A_1151gm6   A     GOLGLYCEROL L - 119
1gm6_A_1151gm6   A     GOLGLYCEROL E - 121
1gm6_A_1151gm6   A     GOLGLYCEROL Y - 123
1i4u_A_1281i4u   A     MPD2-METHYL-2,4-PENTANEDIOL F - 132
1i4u_A_1281i4u   A     MPD2-METHYL-2,4-PENTANEDIOL F - 134
1i4u_A_1281i4u   A     MPD2-METHYL-2,4-PENTANEDIOL F - 136
1l6m_A_1301l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID Y - 132
1l6m_A_1301l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID F - 133
1l6m_A_1301l6m   A     FEFE (III) ION K - 134
1l6m_A_1301l6m   A     DBH2,3-DIHYDROXY-BENZOIC ACID K - 134
1l6m_A_1301l6m   A     DBS2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID K - 134
1qy1_A_1121qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE L - 116
1qy1_A_1121qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE M - 117
1qy1_A_1121qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE G - 118
1qy1_A_1121qy1   A     PRZ2-ISOBUTYL-3-METHOXYPYRAZINE Y - 120
1qy1_A_1121qy1   A     CDCADMIUM ION Q - 136
1qy1_A_1121qy1   A     CDCADMIUM ION E - 139
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1dzk_A_1111dzk   A AC1PRZ BINDING SITE FOR CHAIN AM - 114
1gm6_A_1151gm6   A CAVODOUR-BINDING CAVITYY - 123
1gm6_A_1151gm6   A NAGNAG BINDING SITE FOR CHAIN AD - 128

Clusters included in this Subclass
CLUSTER: EH.5.69
CLUSTER: EH.7.215
CLUSTER: EH.7.32