ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.16.1

Subclass Accession number: 3353
Subclass: 6.16.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 40.0 +/- 23.0
Average RMSD (Å) : 0.500 +/- 0.255

Consensus geometry

d (Å): 11

delta (°): 0-45

theta (°): 135-180

rho (°): 90-135

Consensus Sequence:	hDGSXShXXp
(φψ)-conformation:	bpapaappaa

Pattern:	x	[D]	[ILV]	[AIV]	[FL]	[L]	[FIL]	[D]	[G]	[S]	[gs]	[RS]	[FIL]	x	[AEPS]	x	[DENY]	[F]	[ADEQR]	x	[ILM]	[KLM]	[ADENS]	[F]	[AMV]	x	[ADT]	[FMV]	[IM]
Conservation:	-1.108	1.829	0.125	-0.139	0.490	0.803	-0.185	1.829	1.829	0.803	-0.744	-0.178	-0.191	-1.179	-0.731	-1.065	-0.681	1.829	-0.818	-1.044	0.173	-0.546	-0.736	1.829	-0.376	-0.886	-0.756	-0.379	0.204

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1atz_A_927	1atz	A	927	955	LDVILLLDGSSSFPASYFDEMKSFAKAFI	EEEEEEEE-SSSS-HHHHHHHHHHHHHHH	bbbbbxxxaxaabwaaaaaaaaaaaaaaa
1ijb_A_513	1ijb	A	513	541	LDLVFLLDGSSRLSEAEFEVLKAFVVDMM	EEEEEEEE-BTTS-HHHHHHHHHHHHHHH	bbbbxbbxaxaabxaaaaaaaaaaaaaaa
1mf7_A_133	1mf7	A	133	161	SDIAFLIDGSGSIIPHDFRRMKEFVSTVM	EEEEEEEE--TTS-HHHHHHHHHHHHHHH	bbbbbbbxapaaxxaaaaaaaaaaaaaaa
1mjn_A_130	1mjn	A	130	158	VDLVFLFDGSMSLQPDEFQKILDFMKDVM	EEEEEEEE-BTT--HHHHHHHHHHHHHHH	bbbbxbbxaxaaxxaaaaaaaaaaaaaaa
1n3y_A_131	1n3y	A	131	159	QDIVFLIDGSGSISSRNFATMMNFVRAVI	EEEEEEEE--TTS-HHHHHHHHHHHHHHH	bbbbbbbxapaaxxaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass