Information on SUBCLASS 6.39.1 |
Subclass Accession number: 3379
Subclass: 6.39.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 17.1 +/- 17.4 Average RMSD (Å) : 0.920 +/- 0.179 Consensus geometry
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Consensus Sequence: | hhXhpGhphp |
(φψ)-conformation: | bppppgbpaa |
Pattern: | [FTV] | [ACFMY] | [ilmt] | [IP] | [DEQR] | [GK] | [LVY] | [DEP] | [AGY] | [ADKR] | [ADKR] | [amv] | [AIKM] | [aer] | [aivy] | [FGIL] | [ALTV] |
Conservation: | 0.364 | -0.534 | -0.952 | 0.925 | 0.823 | 2.471 | 0.775 | 1.406 | 0.033 | -0.495 | -0.495 | -0.587 | -0.705 | -1.081 | -1.137 | -0.816 | 0.004 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iug_A_285 | 1iug | A | 287 | 303 | FYLPEGVPYARVKEAFA | EE--TT--HHHHHHHHH | bxxxxgxxaaaaaaaaa |
1o89_A_110 | 1o89 | A | 110 | 126 | VAMPQGLDARKAMIIGT | EE--TT--HHHHHHHHH | bppxpvbbaaaaaaaea |
1tfr_*_122 | 1tfr | - | 123 | 139 | VMDIDKYEADDHIAVLV | EE--TT--HHHHHHHHH | bxbbpvbxaaaaaaaaa |
1vjo_A_317 | 1vjo | A | 320 | 336 | VCIPDGVDGKAVARRLL | EE--TT--HHHHHHHHH | bxxxpvbxaaaaaaaaa |
1xo1_A_121 | 1xo1 | A | 121 | 137 | TFTIRGVEADDMAAYIV | EE--TTB-HHHHHHHHH | bbbbpvbxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1tfr_*_122 | 1tfr | * | MGMAGNESIUM ION | E - 130 |
1tfr_*_122 | 1tfr | * | MGMAGNESIUM ION | A - 131 |
1tfr_*_122 | 1tfr | * | MGMAGNESIUM ION | D - 132 |
1vjo_A_317 | 1vjo | A | MSESELENOMETHIONINE | L - 317 |
Clusters included in this Subclass |
CLUSTER: EH.5.160 |