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Information on SUBCLASS 6.39.1
Subclass Accession number: 3379
Subclass: 6.39.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 17.1 +/- 17.4
Average RMSD (Å) : 0.920 +/- 0.179

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hhXhpGhphp
(φψ)-conformation: bppppgbpaa
Pattern: [FTV][ACFMY][ilmt][IP][DEQR][GK][LVY][DEP][AGY][ADKR][ADKR][amv][AIKM][aer][aivy][FGIL][ALTV]
Conservation:0.364-0.534-0.9520.9250.8232.4710.7751.4060.033-0.495-0.495-0.587-0.705-1.081-1.137-0.8160.004
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1iug_A_2851iug   A287303FYLPEGVPYARVKEAFAEE--TT--HHHHHHHHHbxxxxgxxaaaaaaaaa
1o89_A_1101o89   A110126VAMPQGLDARKAMIIGTEE--TT--HHHHHHHHHbppxpvbbaaaaaaaea
1tfr_*_1221tfr   -123139VMDIDKYEADDHIAVLVEE--TT--HHHHHHHHHbxbbpvbxaaaaaaaaa
1vjo_A_3171vjo   A320336VCIPDGVDGKAVARRLLEE--TT--HHHHHHHHHbxxxpvbxaaaaaaaaa
1xo1_A_1211xo1   A121137TFTIRGVEADDMAAYIVEE--TTB-HHHHHHHHHbbbbpvbxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1tfr_*_1221tfr   *     MGMAGNESIUM ION E - 130
1tfr_*_1221tfr   *     MGMAGNESIUM ION A - 131
1tfr_*_1221tfr   *     MGMAGNESIUM ION D - 132
1vjo_A_3171vjo   A     MSESELENOMETHIONINE L - 317

Clusters included in this Subclass
CLUSTER: EH.5.160